Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19]
284 sequences; 42,306,689 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq180 232 3e-58
>seq180
Length=4864
Score = 232 bits (256), Expect = 3e-58
Identities = 222/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 2344 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 2285
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 2284 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 2228
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 2227 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 2168
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| |||| ||||||||||||||||||||||| || ||||||| |
Sbjct 2167 GTGAACTATGCCTGAGCGGGGTAAAGCCAGAGGAAACTCTGGTGGAAGCCCGCAGCGATA 2108
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 2107 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 2067
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 2730 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 2671
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 2670 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 2611
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 2610 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 2566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079993908200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |