Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19]
284 sequences; 42,306,689 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq130 132 1e-28
seq98 132 1e-28
>seq130
Length=10660
Score = 132 bits (146), Expect = 1e-28
Identities = 202/283 (71%), Gaps = 16/283 (6%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 9568 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 9627
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 9628 ATCGTTACGTCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 9687
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC------TTCGC--GT 178
|| | | |||| ||||||| || ||||||| ||| || | | | ||| | |
Sbjct 9688 CCCTCA-CGTTAAGGCCGCCATTAACCGGGGGTTCCTTCTACACCAAACCTTTCACAATT 9746
Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
||| || || |||||| |||||| ||||||| |||||| |||||| | |
Sbjct 9747 TAGTTA----TTTCCGTTAACCAGCCGGCATCGGGCAGAGATCACACTCTATACTTAGAT 9802
Query 239 TT-TCGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| || | ||| ||| |||||| |||||| | ||||||||||
Sbjct 9803 TTATCATTTTTACGCAAAGTGCTTTGTTTTAATTAAACAGTCG 9845
>seq98
Length=28366
Score = 132 bits (146), Expect = 1e-28
Identities = 202/283 (71%), Gaps = 16/283 (6%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 20041 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 20100
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 20101 ATCGTTACGTCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 20160
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC------TTCGC--GT 178
|| | | |||| ||||||| || ||||||| ||| || | | | ||| | |
Sbjct 20161 CCCTCA-CGTTAAGGCCGCCATTAACCGGGGGTTCCTTCTACACCAAACCTTTCACAATT 20219
Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
||| || || |||||| |||||| ||||||| |||||| |||||| | |
Sbjct 20220 TAGTTA----TTTCCGTTAACCAGCCGGCATCGGGCAGAGATCACACTCTATACTTAGAT 20275
Query 239 TT-TCGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| || | ||| ||| |||||| |||||| | ||||||||||
Sbjct 20276 TTATCATTTTTACGCAAAGTGCTTTGTTTTAATTAAACAGTCG 20318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260796419328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |