Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19]
284 sequences; 42,306,689 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq180 307 2e-81
seq10 93.3 7e-17
>seq180
Length=4864
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3922 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3981
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 3982 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 4041
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 4042 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 4101
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4102 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 4161
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 4162 AAAGAGCTCTCAGTCTGTC 4180
>seq10
Length=1530397
Score = 93.3 bits (102), Expect = 7e-17
Identities = 76/91 (84%), Gaps = 6/91 (7%)
Strand=Plus/Plus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||
Sbjct 1244436 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 1244495
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 1244496 TAAGAACGGCCATGCACCACCGCCCATAAAA 1244526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796797807804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |