Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19]
284 sequences; 42,306,689 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq180 320 3e-85
seq9 82.4 1e-13
seq4 82.4 1e-13
>seq180
Length=4864
Score = 320 bits (354), Expect = 3e-85
Identities = 263/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 4089 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 4034
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 4033 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 3974
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 3973 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 3915
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 3914 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 3856
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 3855 ATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 3796
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 3795 GTCCCTGCCCTTTGTA 3780
>seq9
Length=1640853
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 39018 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 39075
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 39076 TGTGTCGTGCTGGG 39089
>seq4
Length=2286719
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 2015474 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 2015531
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 2015532 TGTGTCGTGCTGGG 2015545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947197309952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |