Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19]
284 sequences; 42,306,689 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq74 203 5e-50
seq50 203 5e-50
seq6 203 5e-50
seq3 203 5e-50
seq1 203 5e-50
>seq74
Length=63049
Score = 203 bits (224), Expect = 5e-50
Identities = 162/190 (85%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 5498 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 5555
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 5556 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 5615
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 5616 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 5673
Query 181 CTTAGCAGGC 190
|| |||||||
Sbjct 5674 CTCAGCAGGC 5683
>seq50
Length=145984
Score = 203 bits (224), Expect = 5e-50
Identities = 162/190 (85%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 110815 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 110872
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 110873 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 110932
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 110933 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 110990
Query 181 CTTAGCAGGC 190
|| |||||||
Sbjct 110991 CTCAGCAGGC 111000
>seq6
Length=1879074
Score = 203 bits (224), Expect = 5e-50
Identities = 162/190 (85%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 809 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 752
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 751 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 692
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 691 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 634
Query 181 CTTAGCAGGC 190
|| |||||||
Sbjct 633 CTCAGCAGGC 624
>seq3
Length=2329954
Score = 203 bits (224), Expect = 5e-50
Identities = 162/190 (85%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 316119 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 316062
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 316061 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 316002
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 316001 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 315944
Query 181 CTTAGCAGGC 190
|| |||||||
Sbjct 315943 CTCAGCAGGC 315934
>seq1
Length=3511474
Score = 203 bits (224), Expect = 5e-50
Identities = 162/190 (85%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 659956 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 659899
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 659898 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 659839
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 659838 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 659781
Query 181 CTTAGCAGGC 190
|| |||||||
Sbjct 659780 CTCAGCAGGC 659771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819197746176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |