Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19] 284 sequences; 42,306,689 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq74 203 5e-50 seq50 203 5e-50 seq6 203 5e-50 seq3 203 5e-50 seq1 203 5e-50 >seq74 Length=63049 Score = 203 bits (224), Expect = 5e-50 Identities = 162/190 (85%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| ||| |||||| Sbjct 5498 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 5555 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||| Sbjct 5556 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 5615 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 5616 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 5673 Query 181 CTTAGCAGGC 190 || ||||||| Sbjct 5674 CTCAGCAGGC 5683 >seq50 Length=145984 Score = 203 bits (224), Expect = 5e-50 Identities = 162/190 (85%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| ||| |||||| Sbjct 110815 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 110872 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||| Sbjct 110873 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 110932 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 110933 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 110990 Query 181 CTTAGCAGGC 190 || ||||||| Sbjct 110991 CTCAGCAGGC 111000 >seq6 Length=1879074 Score = 203 bits (224), Expect = 5e-50 Identities = 162/190 (85%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| ||| |||||| Sbjct 809 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 752 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||| Sbjct 751 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 692 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 691 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 634 Query 181 CTTAGCAGGC 190 || ||||||| Sbjct 633 CTCAGCAGGC 624 >seq3 Length=2329954 Score = 203 bits (224), Expect = 5e-50 Identities = 162/190 (85%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| ||| |||||| Sbjct 316119 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 316062 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||| Sbjct 316061 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 316002 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 316001 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 315944 Query 181 CTTAGCAGGC 190 || ||||||| Sbjct 315943 CTCAGCAGGC 315934 >seq1 Length=3511474 Score = 203 bits (224), Expect = 5e-50 Identities = 162/190 (85%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| ||| |||||| Sbjct 659956 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 659899 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||| Sbjct 659898 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 659839 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 659838 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 659781 Query 181 CTTAGCAGGC 190 || ||||||| Sbjct 659780 CTCAGCAGGC 659771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197746176