Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04]
1,346 sequences; 41,601,338 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq580 360 3e-97
seq629 102 1e-19
>seq580
Length=8372
Score = 360 bits (398), Expect = 3e-97
Identities = 237/258 (92%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3421 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3362
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 3361 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 3303
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 3302 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 3244
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3243 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGA 3184
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 3183 AAGAGCTCTCAATCTGTC 3166
>seq629
Length=34156
Score = 102 bits (112), Expect = 1e-19
Identities = 78/91 (86%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA-----ATCAC-TCCACCAAC 203
||||| ||||||||||||||||||| |||||| ||||||| ||||| ||| |||||
Sbjct 20281 CAGGTCAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAACGGGATCACTTCCGCCAAC 20222
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
|||||||||||||||||||| |||||| ||
Sbjct 20221 TAAGAACGGCCATGCACCACAGCCCATAAAA 20191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796789610226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |