Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq580 360 3e-97 seq629 102 1e-19 >seq580 Length=8372 Score = 360 bits (398), Expect = 3e-97 Identities = 237/258 (92%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3421 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3362 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 3361 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 3303 Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| || ||| | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 3302 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 3244 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 3243 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGA 3184 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 3183 AAGAGCTCTCAATCTGTC 3166 >seq629 Length=34156 Score = 102 bits (112), Expect = 1e-19 Identities = 78/91 (86%), Gaps = 6/91 (7%) Strand=Plus/Minus Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA-----ATCAC-TCCACCAAC 203 ||||| ||||||||||||||||||| |||||| ||||||| ||||| ||| ||||| Sbjct 20281 CAGGTCAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAACGGGATCACTTCCGCCAAC 20222 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234 |||||||||||||||||||| |||||| || Sbjct 20221 TAAGAACGGCCATGCACCACAGCCCATAAAA 20191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796789610226