Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq580 223 6e-56 >seq580 Length=8372 Score = 223 bits (246), Expect = 6e-56 Identities = 223/279 (80%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||||||||||| |||| ||| |||||| Sbjct 7170 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 7227 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||| Sbjct 7228 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 7287 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 7288 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 7345 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 || |||||| || ||| || | || ||||||| || | | | | ||| |||| Sbjct 7346 CTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATTGT 7402 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| || |||| ||| |||||||||||||||||| Sbjct 7403 AATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 7441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819189318144