Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1566 360 3e-97 seq161 98.7 2e-18 >seq1566 Length=8192 Score = 360 bits (398), Expect = 3e-97 Identities = 237/258 (92%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5244 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5303 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 5304 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 5362 Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| || ||| | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 5363 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 5421 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 5422 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGA 5481 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 5482 AAGAGCTCTCAATCTGTC 5499 >seq161 Length=38832 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/91 (85%), Gaps = 6/91 (7%) Strand=Plus/Minus Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203 ||||| | ||||||||||||||||| ||||| |||||||| ||||| || ||||| Sbjct 26564 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCCAAC 26505 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234 ||||||||||||||||||||| |||||| || Sbjct 26504 TAAGAACGGCCATGCACCACCGCCCATATAA 26474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796744778274