Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3814 295 1e-77 seq3306 98.7 2e-18 >seq3814 Length=9652 Score = 295 bits (326), Expect = 1e-77 Identities = 198/217 (91%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4111 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 4052 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 4051 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 3993 Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| || ||| | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 3992 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 3934 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 | ||||||||||||||||||||||||||||||||||| Sbjct 3933 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATG 3897 >seq3306 Length=34911 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/91 (85%), Gaps = 6/91 (7%) Strand=Plus/Plus Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203 ||||| | ||||||||||||||||| ||||| |||||||| ||||| || ||||| Sbjct 14308 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCCAAC 14367 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234 ||||||||||||||||||||| |||||| || Sbjct 14368 TAAGAACGGCCATGCACCACCGCCCATATAA 14398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796766800581