Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23] 1,787 sequences; 43,625,833 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq995 143 1e-32 seq924 143 1e-32 seq913 143 1e-32 seq1211 105 4e-21 seq542 89.7 3e-16 >seq995 Length=218 Score = 143 bits (158), Expect = 1e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || | Sbjct 137 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 79 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 78 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 21 >seq924 Length=231 Score = 143 bits (158), Expect = 1e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || | Sbjct 180 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 122 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 64 >seq913 Length=231 Score = 143 bits (158), Expect = 1e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || | Sbjct 8 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 66 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 67 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 124 >seq1211 Length=126822 Score = 105 bits (116), Expect = 4e-21 Identities = 101/129 (78%), Gaps = 13/129 (10%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA------- 52 ||||||| | |||| | |||| |||||||||||| || ||||||| | || Sbjct 21881 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAAAAAAAAAAAAAA 21822 Query 53 ----CATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 || || |||||||||| ||||||||||| | ||||||||||||||||||||||||| Sbjct 21821 AAAACACCGTCCGATCCCTAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGAT 21763 Query 109 CGTCTTCGA 117 ||||||||| Sbjct 21762 CGTCTTCGA 21754 >seq542 Length=340 Score = 89.7 bits (98), Expect = 3e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 CTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395335930