Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23]
1,787 sequences; 43,625,833 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq617 170 2e-40
seq542 170 2e-40
seq849 163 3e-38
seq999 107 2e-21
>seq617
Length=303
Score = 170 bits (188), Expect = 2e-40
Identities = 124/141 (88%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 173 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 114
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 113 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 54
Query 126 C-ACCAATGAA-GGCATACGG 144
| ||| |||| ||||| |||
Sbjct 53 CGCCCAGTGAAGGGCATGCGG 33
>seq542
Length=340
Score = 170 bits (188), Expect = 2e-40
Identities = 124/141 (88%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 196 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 255
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 256 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 315
Query 126 C-ACCAATGAA-GGCATACGG 144
| ||| |||| ||||| |||
Sbjct 316 CGCCCAGTGAAGGGCATGCGG 336
>seq849
Length=241
Score = 163 bits (180), Expect = 3e-38
Identities = 123/141 (87%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 58 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 117
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||| ||||||||| | ||
Sbjct 118 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAG-CCTGGTTCCCCGACA 176
Query 126 C-ACCAATGAA-GGCATACGG 144
| ||| |||| ||||| |||
Sbjct 177 CGCCCAGTGAAGGGCATGCGG 197
>seq999
Length=216
Score = 107 bits (118), Expect = 2e-21
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 74 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 15
Query 66 GGCGTAAGCCTGCT 79
||| || |||||||
Sbjct 14 GGCATAGGCCTGCT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595189696158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |