Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23]
1,787 sequences; 43,625,833 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq617 288 1e-75
seq542 288 1e-75
seq849 244 1e-62
seq999 215 5e-54
>seq617
Length=303
Score = 288 bits (318), Expect = 1e-75
Identities = 179/191 (94%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 60 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 119
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 120 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 178
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 179 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 238
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 239 TTGGATTTATT 249
>seq542
Length=340
Score = 288 bits (318), Expect = 1e-75
Identities = 179/191 (94%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 309 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 250
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 249 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 191
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 190 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 131
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 130 TTGGATTTATT 120
>seq849
Length=241
Score = 244 bits (270), Expect = 1e-62
Identities = 159/172 (92%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 170 GGAACCAGG-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 112
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 111 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 53
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGG 172
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||
Sbjct 52 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGG 1
>seq999
Length=216
Score = 215 bits (238), Expect = 5e-54
Identities = 139/151 (92%), Gaps = 1/151 (1%)
Strand=Plus/Plus
Query 41 AGCAGGCCTTTGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATT 100
||||||||| ||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 1 AGCAGGCCTATGCCCGAATACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATT 60
Query 101 TTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTC 160
|||| |||||||||||||| |||||||||| |||| ||| ||||||||| |||||||||
Sbjct 61 TTGTTGGTTTCTAGGACCG-CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTC 119
Query 161 AATTGTCAAAGGTGAAATTCTTGGATTTATT 191
|||||||| ||||||||||||||||||||||
Sbjct 120 AATTGTCAGAGGTGAAATTCTTGGATTTATT 150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511991136480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |