Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23]
1,787 sequences; 43,625,833 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 188 1e-45
seq962 178 2e-42
seq658 105 1e-20
seq582 105 1e-20
>seq1094
Length=200
Score = 188 bits (208), Expect = 1e-45
Identities = 159/190 (84%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||| ||||| | | |||| |||||||||||||||| |||| ||| ||||||
Sbjct 3 GTACGAGAGTAACCGTTCA-TGCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 60
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 61 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 120
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 121 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 178
Query 181 CTTAGCAGGC 190
|| |||||||
Sbjct 179 CTCAGCAGGC 188
>seq962
Length=217
Score = 178 bits (196), Expect = 2e-42
Identities = 145/171 (85%), Gaps = 4/171 (2%)
Strand=Plus/Plus
Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79
||||||| |||||||||||| ||| |||| ||| |||||||||||||||||||||||||
Sbjct 6 ATTCAGA-TAATTGGTTTTTACGGTTGTCCGACAGGGCAGTGCCGCGAAGCTACCATCTG 64
Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCC 139
| |||| | ||||||||||||||||||| |||||| |||||||||| | ||| | ||||
Sbjct 65 CAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCAGAACGCGACGATAC-CTCC 123
Query 140 TGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGC 190
|||| | ||| |||||| ||||||||||||||| || | || |||||||
Sbjct 124 CGCACGT-TTAG-CGGATAAGAATAGGCTTCGGCCTCGTATCTCAGCAGGC 172
>seq658
Length=289
Score = 105 bits (116), Expect = 1e-20
Identities = 138/183 (75%), Gaps = 6/183 (3%)
Strand=Plus/Plus
Query 97 GCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGA 156
||||||||||| |||||| |||||||||| | ||| | |||| |||| | ||| ||||
Sbjct 1 GCCTCTAAGTCGGAATCCTTGCCAGAACGCGACGATAC-CTCCCGCACGTT-TAGACGGA 58
Query 157 TACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCG 215
|| ||||||||||||||| || | || |||||| || ||| || | || ||||||
Sbjct 59 TAAGAATAGGCTTCGGCCTCGTATCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCG 116
Query 216 CGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGAC 275
| || | | | | ||| |||| ||||| || |||| ||| |||||||||||||||
Sbjct 117 CCCGGTGGTGA-TTCGCGTATTGTAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGAC 175
Query 276 GAC 278
|||
Sbjct 176 GAC 178
>seq582
Length=319
Score = 105 bits (116), Expect = 1e-20
Identities = 82/94 (87%), Gaps = 3/94 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||| |||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 229 GTACGAGAGGA-CCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 285
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGA 94
|||||||||||||||||||| |||| | ||||||
Sbjct 286 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGA 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819185818368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |