Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23] 1,787 sequences; 43,625,833 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1094 188 1e-45 seq962 178 2e-42 seq658 105 1e-20 seq582 105 1e-20 >seq1094 Length=200 Score = 188 bits (208), Expect = 1e-45 Identities = 159/190 (84%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||| ||||| | | |||| |||||||||||||||| |||| ||| |||||| Sbjct 3 GTACGAGAGTAACCGTTCA-TGCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 60 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||| Sbjct 61 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 120 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 121 GAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 178 Query 181 CTTAGCAGGC 190 || ||||||| Sbjct 179 CTCAGCAGGC 188 >seq962 Length=217 Score = 178 bits (196), Expect = 2e-42 Identities = 145/171 (85%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79 ||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||||||||| Sbjct 6 ATTCAGA-TAATTGGTTTTTACGGTTGTCCGACAGGGCAGTGCCGCGAAGCTACCATCTG 64 Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCC 139 | |||| | ||||||||||||||||||| |||||| |||||||||| | ||| | |||| Sbjct 65 CAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCAGAACGCGACGATAC-CTCC 123 Query 140 TGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGC 190 |||| | ||| |||||| ||||||||||||||| || | || ||||||| Sbjct 124 CGCACGT-TTAG-CGGATAAGAATAGGCTTCGGCCTCGTATCTCAGCAGGC 172 >seq658 Length=289 Score = 105 bits (116), Expect = 1e-20 Identities = 138/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 97 GCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGA 156 ||||||||||| |||||| |||||||||| | ||| | |||| |||| | ||| |||| Sbjct 1 GCCTCTAAGTCGGAATCCTTGCCAGAACGCGACGATAC-CTCCCGCACGTT-TAGACGGA 58 Query 157 TACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCG 215 || ||||||||||||||| || | || |||||| || ||| || | || |||||| Sbjct 59 TAAGAATAGGCTTCGGCCTCGTATCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCG 116 Query 216 CGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGAC 275 | || | | | | ||| |||| ||||| || |||| ||| ||||||||||||||| Sbjct 117 CCCGGTGGTGA-TTCGCGTATTGTAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGAC 175 Query 276 GAC 278 ||| Sbjct 176 GAC 178 >seq582 Length=319 Score = 105 bits (116), Expect = 1e-20 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||| |||| | |||||| |||||||||||||||| |||| ||| |||||| Sbjct 229 GTACGAGAGGA-CCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 285 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGA 94 |||||||||||||||||||| |||| | |||||| Sbjct 286 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGA 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819185818368