Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218345.1_202017-07-14]
2,695 sequences; 39,383,118 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1290 158 5e-36
seq85 145 3e-32
seq420 122 4e-25
seq2391 77.0 1e-11
>seq1290
Length=1163
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 423 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAAGCGGGCGGTAAATTCCGTCCAAGGC 482
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| || ||||||||||||| ||||
Sbjct 483 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCACGAGGGAAAGATGAAAAGGACTT 542
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 543 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 587
Score = 132 bits (146), Expect = 2e-28
Identities = 117/146 (80%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 54 GGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACC 113
||||||||||| | || ||| |||||||| | || || |||||||| ||| |||||||
Sbjct 657 GGGAATGCAGCCCCAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACC 716
Query 114 GATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAG 173
||||||| ||||||| || ||||||||||||| |||||| ||||||||| ||| ||
Sbjct 717 GATAGCGAACAAGTACCACGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAG 776
Query 174 CACGTGAAATTGTTGAAAGGGAAGCG 199
| ||||||||| | |||||||||
Sbjct 777 TGCTTGAAATTGTCGGGAGGGAAGCG 802
>seq85
Length=211
Score = 145 bits (160), Expect = 3e-32
Identities = 103/118 (87%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 211 TTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGT 152
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 151 GGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 94
>seq420
Length=304
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 10 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 69
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 70 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 129
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 130 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 169
>seq2391
Length=1621
Score = 77.0 bits (84), Expect = 1e-11
Identities = 56/65 (86%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||| || |||| | ||| ||||||||||| ||||| | |||||||||||
Sbjct 1 CTCTGGTGGAGGCCCGAAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGG 60
Query 679 GGCGA 683
|||||
Sbjct 61 GGCGA 65
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079942192250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |