Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218345.1_202017-07-14] 2,695 sequences; 39,383,118 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1280 342 2e-91 seq2391 181 3e-43 seq1923 118 3e-24 >seq1280 Length=1727 Score = 342 bits (378), Expect = 2e-91 Identities = 278/330 (84%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 1200 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 1259 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1260 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 1319 Query 127 GGCCCGC--GA-AGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCA 182 || |||| || || |||| | ||||| || || || | || | ||||| ||| Sbjct 1320 GGGCCGCAGGAGCGGCCCTTGGGTCTAGAAAGAGG--GGCGATGCCCCGCTTCCGGCTCA 1377 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||| Sbjct 1378 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCGA-GGCTCCCA 1436 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1437 CTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 1496 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCG 332 ||||||||||||||||||| ||| ||||| Sbjct 1497 CTTCTTTCCCCGCTGATTCTGCC--GCCCG 1524 Score = 205 bits (226), Expect = 3e-50 Identities = 175/210 (83%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 119 CCCGGATCGGCCCGC--GAA-GGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TT 174 |||||||||| |||| || || |||| | ||||| || || || | || | || Sbjct 1521 CCCGGATCGGGCCGCAGGAGCGGCCCTTGGGTCTAGAAAGAGG--GGCGATGCCCCGCTT 1578 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234 ||| ||| || ||||||||| |||| ||| ||||||||||||||||| ||||| | Sbjct 1579 CCGGCTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCGA- 1637 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1638 GGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 1697 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGC 324 ||||||||||||||||||||||||||| || Sbjct 1698 AACAGGGTCTTCTTTCCCCGCTGATTCTGC 1727 >seq2391 Length=1621 Score = 181 bits (200), Expect = 3e-43 Identities = 102/103 (99%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1621 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 1562 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||| |||||| Sbjct 1561 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACATC 1519 >seq1923 Length=720 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 452 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 511 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 512 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 566 Query 127 GGCCCGCG 134 || |||| Sbjct 567 GGGTCGCG 574 Score = 113 bits (124), Expect = 1e-22 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 618 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 677 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 |||| |||| ||| ||||||||| ||||||||||||||| || Sbjct 678 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCA 719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635155931360