Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218345.1_202017-07-14]
2,695 sequences; 39,383,118 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 342 2e-91
seq2391 181 3e-43
seq1923 118 3e-24
>seq1280
Length=1727
Score = 342 bits (378), Expect = 2e-91
Identities = 278/330 (84%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1200 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 1259
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1260 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 1319
Query 127 GGCCCGC--GA-AGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCA 182
|| |||| || || |||| | ||||| || || || | || | ||||| |||
Sbjct 1320 GGGCCGCAGGAGCGGCCCTTGGGTCTAGAAAGAGG--GGCGATGCCCCGCTTCCGGCTCA 1377
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||||||||| |||| ||| ||||||||||||||||| ||||| | ||||||||
Sbjct 1378 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCGA-GGCTCCCA 1436
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 CTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 1496
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCG 332
||||||||||||||||||| ||| |||||
Sbjct 1497 CTTCTTTCCCCGCTGATTCTGCC--GCCCG 1524
Score = 205 bits (226), Expect = 3e-50
Identities = 175/210 (83%), Gaps = 7/210 (3%)
Strand=Plus/Plus
Query 119 CCCGGATCGGCCCGC--GAA-GGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TT 174
|||||||||| |||| || || |||| | ||||| || || || | || | ||
Sbjct 1521 CCCGGATCGGGCCGCAGGAGCGGCCCTTGGGTCTAGAAAGAGG--GGCGATGCCCCGCTT 1578
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234
||| ||| || ||||||||| |||| ||| ||||||||||||||||| ||||| |
Sbjct 1579 CCGGCTCACGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCGA- 1637
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1638 GGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 1697
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGC 324
||||||||||||||||||||||||||| ||
Sbjct 1698 AACAGGGTCTTCTTTCCCCGCTGATTCTGC 1727
>seq2391
Length=1621
Score = 181 bits (200), Expect = 3e-43
Identities = 102/103 (99%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 1562
Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1561 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACATC 1519
>seq1923
Length=720
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 452 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 511
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 512 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 566
Query 127 GGCCCGCG 134
|| ||||
Sbjct 567 GGGTCGCG 574
Score = 113 bits (124), Expect = 1e-22
Identities = 86/102 (84%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 618 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 677
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108
|||| |||| ||| ||||||||| ||||||||||||||| ||
Sbjct 678 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCA 719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635155931360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |