Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218355.1_202017-07-14]
2,879 sequences; 39,272,241 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq2480 143 1e-32
>seq2480
Length=166223
Score = 143 bits (158), Expect = 1e-32
Identities = 104/118 (88%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || |
Sbjct 152327 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 152385
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 152386 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 152443
Score = 89.7 bits (98), Expect = 3e-16
Identities = 56/59 (95%), Gaps = 1/59 (2%)
Strand=Plus/Plus
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||
Sbjct 152456 CCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCTTCTTCGA 152513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278392485810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |