Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218475.1_202017-07-14]
1,038 sequences; 42,988,316 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq9 360 3e-97
seq425 98.7 2e-18
>seq9
Length=8462
Score = 360 bits (398), Expect = 3e-97
Identities = 237/258 (92%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4782 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 4841
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 4842 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 4900
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 4901 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 4959
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 4960 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCAAGA 5019
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 5020 AAGAGCTCTCAATCTGTC 5037
>seq425
Length=34527
Score = 98.7 bits (108), Expect = 2e-18
Identities = 77/91 (85%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || |||||
Sbjct 20715 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCCAAC 20656
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 20655 TAAGAACGGCCATGCACCACCGCCCATATAA 20625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796791987678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |