Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218485.1_202017-07-14]
818 sequences; 42,445,515 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 1e-32
seq45 98.7 6e-19
>seq5
Length=8130
Score = 143 bits (158), Expect = 1e-32
Identities = 104/118 (88%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || |
Sbjct 2990 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 2932
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2931 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2874
>seq45
Length=347544
Score = 98.7 bits (108), Expect = 6e-19
Identities = 88/111 (79%), Gaps = 12/111 (11%)
Strand=Plus/Minus
Query 18 TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA-----------CATCGCCCGATCCC 66
|||| |||||||||||| || ||||||| | || || || ||||||||
Sbjct 100681 TTTCGTGTAAGGTGCCGAACGGGTCAAAAAAAAAAAAAAAAAAAAACACCGTCCGATCCC 100622
Query 67 TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|| ||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 100621 TAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 100572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278397865020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |