Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marssonina_20coronariae_20[genbank_20GCA_5F002204255.1_202017-06-21] 589 sequences; 50,267,101 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq419 273 3e-71 >seq419 Length=2813 Score = 273 bits (302), Expect = 3e-71 Identities = 201/229 (88%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 2187 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 2130 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 2129 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 2070 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||| | | |||||||| | ||||||||||||||||||| Sbjct 2069 ACCCAGGCCTTTCGGCCAAGGAGGAA-ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 2011 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2010 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751995709135