Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Marssonina_20coronariae_20[genbank_20GCA_5F002204255.1_202017-06-21]
589 sequences; 50,267,101 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq77 515 7e-144
seq434 491 8e-137
>seq77
Length=605
Score = 515 bits (570), Expect = 7e-144
Identities = 291/295 (99%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 540 TACTAAGCTGAATTACCATTGGGGCGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 481
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 421
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 361
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 301
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 246
>seq434
Length=2313
Score = 491 bits (544), Expect = 8e-137
Identities = 286/295 (97%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 2248 TACTAAGCTGAATTACCATTAGGGCGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 2189
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 CGACGGTCTAAACCCAGCTTACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 2129
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 ATTCTGCTTCGGTATAATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 2069
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2068 AAACGCTTGGCTGCCACAAGCCAGTTATCCCTATGGTAACTTTTCTGGCACCTCTAGCCT 2009
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2008 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854394967584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |