Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marssonina_20coronariae_20[genbank_20GCA_5F002204255.1_202017-06-21] 589 sequences; 50,267,101 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq419 96.9 2e-18 >seq419 Length=2813 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||||| || |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 2236 TCCGAGAGC-CTCACTTAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2180 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || |||||||| Sbjct 2179 GGCAGGGACGTAAT-CAGCGCAAGCT 2155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798339020