Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marssonina_20coronariae_20[genbank_20GCA_5F002204255.1_202017-06-21] 589 sequences; 50,267,101 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq419 176 5e-42 >seq419 Length=2813 Score = 176 bits (194), Expect = 5e-42 Identities = 158/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || Sbjct 1399 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 1340 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 1339 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 1280 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182 || ||| |||| ||||| | ||||| ||| ||| | | ||| |||| | ||| Sbjct 1279 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAAACCCGGTCGGACCAGTGCACGC 1221 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 1220 GGTGAGGCGGACC 1208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595196603826