Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Marssonina_20coronariae_20[genbank_20GCA_5F002204255.1_202017-06-21]
589 sequences; 50,267,101 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq419 830 0.0
>seq419
Length=2813
Score = 830 bits (920), Expect = 0.0
Identities = 478/490 (98%), Gaps = 0/490 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1013
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1012 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGTGAGCCGTT 953
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 952 TCTCAGGCTCACTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 893
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 892 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 833
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||
Sbjct 832 CAAGGCCATGCGATTCGTTGAGTTATTATGAATCACCAAGGAGCCCCGGAGGGCATTGGT 773
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 772 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 713
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 712 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 653
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 GCCATTCGCAGTTTCACCGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 593
Query 481 AGACAAGCAT 490
||||||||||
Sbjct 592 AGACAAGCAT 583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510391103744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |