Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23]
173 sequences; 38,835,037 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq22 363 1e-95
seq3 141 7e-29
>seq22
Length=534521
Score = 363 bits (402), Expect = 1e-95
Identities = 668/970 (69%), Gaps = 8/970 (1%)
Strand=Plus/Minus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
|| |||| ||| || || || || || | ||||||||||| | ||| || || || |
Sbjct 117596 ACGAACTGGGGCAGAGCCAGGGAAGCCAAATTGCAGACAGCGACCTCATCGGGGGCAGAG 117537
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
||||||| || || ||||| || || || ||| ||||| ||||| |||| || ||
Sbjct 117536 TACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTG 117477
Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172
|||||||| ||| ||||||||||| | |||| | || | ||||||||| || | |
Sbjct 117476 CTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCC 117417
Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231
|| | |||||||| ||| || | ||||| | | | | || || | ||| | |
Sbjct 117416 TCGAGGATGGCGTACCACAGCTTCTGGGCCTTGATCTTCTG-ACGACCACGACCCTCGGC 117358
Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291
||||| | ||||| || ||||| || || | || |||| || | || ||
Sbjct 117357 CTCGTACTTCTCGTACAGAGCCTCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCA 117298
Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351
|| || |||||||| || | ||| || || | || || ||||| ||| || || ||
Sbjct 117297 CTCGTTGGGACACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTC 117238
Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411
|| |||||||||||| ||||||||| || || || |||||| ||||||| || ||
Sbjct 117237 GGGAATCCAGAGGGCGAGGAAGAGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTT 117178
Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471
||| | ||||||||||||||||| || || ||||| || || ||||| |||||||| |
Sbjct 117177 GCGGAGGTCGAGGAACTCAAAGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGC 117118
Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531
||| | ||| ||| || ||||||||||| | || ||||||||||||||||
Sbjct 117117 GCCAGGTCTCTTGTTGCCGCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAG 117058
Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591
||| || || | ||||| || | || ||||||||| | ||| ||| || || ||
Sbjct 117057 CATGGGAACAATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACG 116998
Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-G 66649
|| ||| | ||||||||||||||||| ||| |||| ||||| ||||| ||
Sbjct 116997 GATGCGGTGGATGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTT 116938
Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709
| | |||| | |||||||||||| ||| |||| ||| | ||| |||| ||
Sbjct 116937 GAGAGTGTC--ATAGATGCCGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGAC 116880
Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769
||| || | | ||| || | || ||| |||||||| | || || || |||||
Sbjct 116879 GAAAGCTGAGCCTGGGGAGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTAC 116820
Query 66770 TGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCG 66829
| || |||||| ||||| ||||| |||||| ||||||| ||||| || || |||
Sbjct 116819 TTGCTTGACATGAGGTTGTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCG 116760
Query 66830 AGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCAT 66888
| | |||| ||||| | | || || || || ||||| | | | |||| | |
Sbjct 116759 ACAGACACA-CGCATGATCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAG 116701
Query 66889 TAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATG 66948
| ||| ||||| || |||||||||| ||||||||| ||| ||||| ||| | |
Sbjct 116700 CAGGTATGAGCGCTCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTA 116641
Query 66949 CACGATGGCC 66958
||| ||||||
Sbjct 116640 CACAATGGCC 116631
Score = 152 bits (168), Expect = 4e-32
Identities = 329/482 (68%), Gaps = 24/482 (5%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|||||||| |||||||| | | |||||| |||| ||| | ||| |||||||||||||||
Sbjct 118493 TCGACCGTAAACTGGATAGGCTGAGCAGCAGCCTGGGTACGAAGGTAGTACATGCCGGTC 118434
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
||||| || ||| ||| || ||| ||||| | || | || |||| | | | || |
Sbjct 118433 TTGAGACCGAGC-TTCCAGCCAGTGAAGTGCAT-GCTGGTGATCTTGCCCATTGTGGGGT 118376
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || |||| ||||| |||||| || || ||| || || |||||||
Sbjct 118375 CCTTCATGTGGATGTTCAGAGACTGGGACTGATCAATAAAAGCACCGCGGTCGGCAGCCA 118316
Query 65256 TGTCAATGATACGAC-GTCC----CGATATCTCCCAGACGGTCTTGTACAG-GCGACGTA 65309
| | ||||| |||| || |||||||||||||||||||| || || | |
Sbjct 118315 T-----TTGCACGACTGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTG-A 118262
Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369
| || || || | |||| ||| || ||||| | ||||| ||||| ||
Sbjct 118261 CATCGGCGGGGATGTTGGGGATGTTCTGAACAGAACCGCCCTCGGCAATGATGCGGTTCT 118202
Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAG----ATGTTGAACCAAGTGACGATTG 65425
||| || ||||| | ||||| |||| ||| || || ||||| | |||
Sbjct 118201 TCATGCTGTCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGGAGCCAAG----GGTTG 118146
Query 65426 ATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCA 65485
| ||| ||||| || || | || |||||||| |||||||| || ||| || |||
Sbjct 118145 ACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATGTTTGAGGTGTAAGGCTCA 118086
Query 65486 AAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAAC 65545
||| | || ||||||| ||||| |||| ||| ||||| |||||||| ||||||| |
Sbjct 118085 AAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTAGGCATGGGGGCGACCAGC 118026
Query 65546 AA 65547
||
Sbjct 118025 AA 118024
>seq3
Length=3980562
Score = 141 bits (156), Expect = 7e-29
Identities = 292/434 (67%), Gaps = 3/434 (1%)
Strand=Plus/Plus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | |||||||||| | || ||||| || | || ||| | ||||| ||| |
Sbjct 2739089 GCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 2739148
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| || || || |||||||| || |||||| ||| ||| | || || || ||||||
Sbjct 2739149 AAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAG 2739208
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677
||| | || ||| ||||| | || ||| | | || ||| || ||
Sbjct 2739209 GGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTCCCAC---CTCAAGAACCGCCCCAGC 2739265
Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
|| ||| || | ||||| | || || || | ||||||||||| || || ||
Sbjct 2739266 AAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACC 2739325
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
|| ||| ||||| | | || | |||||||| | || ||| |||||| || ||
Sbjct 2739326 GAGGCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAG 2739385
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857
|| || |||||||| || | |||| | | || | || | |||| | | | |||
Sbjct 2739386 TTCGTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAAC 2739445
Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917
|| ||||| |||||||| | || || |||| |||||||| || || |||||||| ||
Sbjct 2739446 CCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGC 2739505
Query 61918 GTAGGCGACTATCA 61931
|| ||||| || ||
Sbjct 2739506 GTCGGCGAGTACCA 2739519
Score = 134 bits (148), Expect = 1e-26
Identities = 235/335 (70%), Gaps = 9/335 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| ||||| |
Sbjct 2738608 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATCTC 2738667
Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | | | | |||| | ||| | | |||||
Sbjct 2738668 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGAG-GATGAGAAGTACTTCATCTC 2738726
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | |||| ||||| ||||| |||||||| |||||||| ||||| | | || ||
Sbjct 2738727 GCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 2738786
Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| || | ||||| || | | |||||||| || ||||||||||||||||| |
Sbjct 2738787 CTTCA-GCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 2738845
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| ||||||| |||| ||| | ||||| || || ||| ||| ||||| |
Sbjct 2738846 TGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACACCTACGTCAAGGAGCCCG 2738905
Query 61382 CGGAACGTGAACGA-TTGTTCAATGCCATCGAGAC 61415
| | || || | | |||||||| ||||| || ||
Sbjct 2738906 CCCAGCG-GACCCACTTGTTCAACGCCATTGACAC 2738939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567161752720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |