Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microdochium_20bolleyi_20[genbank_20GCA_5F001566295.1_202016-02-23] 173 sequences; 38,835,037 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq22 363 1e-95 seq3 141 7e-29 >seq22 Length=534521 Score = 363 bits (402), Expect = 1e-95 Identities = 668/970 (69%), Gaps = 8/970 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 || |||| ||| || || || || || | ||||||||||| | ||| || || || | Sbjct 117596 ACGAACTGGGGCAGAGCCAGGGAAGCCAAATTGCAGACAGCGACCTCATCGGGGGCAGAG 117537 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||| || || ||||| || || || ||| ||||| ||||| |||| || || Sbjct 117536 TACTCGATGATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTG 117477 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||||||| ||| ||||||||||| | |||| | || | ||||||||| || | | Sbjct 117476 CTCTTGCGGTTGGCAGCATCCTTGTAGAGCATGAAAGGGTTACCGGTCTCAGTCTGAGCC 117417 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231 || | |||||||| ||| || | ||||| | | | | || || | ||| | | Sbjct 117416 TCGAGGATGGCGTACCACAGCTTCTGGGCCTTGATCTTCTG-ACGACCACGACCCTCGGC 117358 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 ||||| | ||||| || ||||| || || | || |||| || | || || Sbjct 117357 CTCGTACTTCTCGTACAGAGCCTCGAACTCGTCGCCGTACACATCGGCGAGGCCAGGGCA 117298 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 || || |||||||| || | ||| || || | || || ||||| ||| || || || Sbjct 117297 CTCGTTGGGACACATGAGAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAACAGGTC 117238 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411 || |||||||||||| ||||||||| || || || |||||| ||||||| || || Sbjct 117237 GGGAATCCAGAGGGCGAGGAAGAGATCACGGGCACGGATCTCCTCCTTGCCGTGGTTCTT 117178 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 ||| | ||||||||||||||||| || || ||||| || || ||||| |||||||| | Sbjct 117177 GCGGAGGTCGAGGAACTCAAAGACATCCGCGTGCCAGGGCTCGAGGTAAATGGCGAAAGC 117118 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 ||| | ||| ||| || ||||||||||| | || |||||||||||||||| Sbjct 117117 GCCAGGTCTCTTGTTGCCGCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGCAG 117058 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 ||| || || | ||||| || | || ||||||||| | ||| ||| || || || Sbjct 117057 CATGGGAACAATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTAGCACG 116998 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-G 66649 || ||| | ||||||||||||||||| ||| |||| ||||| ||||| || Sbjct 116997 GATGCGGTGGATGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTT 116938 Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709 | | |||| | |||||||||||| ||| |||| ||| | ||| |||| || Sbjct 116937 GAGAGTGTC--ATAGATGCCGTCAATGCTATCATCCTTCATGTCGACAAGGAAGCAGGAC 116880 Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769 ||| || | | ||| || | || ||| |||||||| | || || || ||||| Sbjct 116879 GAAAGCTGAGCCTGGGGAGTACCAGCGTTGAACAGGGTGGGAGAGGCATGTGTGAAGTAC 116820 Query 66770 TGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCG 66829 | || |||||| ||||| ||||| |||||| ||||||| ||||| || || ||| Sbjct 116819 TTGCTTGACATGAGGTTGTAAGTCTCAATGACACGCTCAATGTCGTCGCCGTGGATGCCG 116760 Query 66830 AGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCAT 66888 | | |||| ||||| | | || || || || ||||| | | | |||| | | Sbjct 116759 ACAGACACA-CGCATGATCATGTGCTGGGGACGCTCGACGATCTTGCCGTTGAGCTTGAG 116701 Query 66889 TAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATG 66948 | ||| ||||| || |||||||||| ||||||||| ||| ||||| ||| | | Sbjct 116700 CAGGTATGAGCGCTCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTA 116641 Query 66949 CACGATGGCC 66958 ||| |||||| Sbjct 116640 CACAATGGCC 116631 Score = 152 bits (168), Expect = 4e-32 Identities = 329/482 (68%), Gaps = 24/482 (5%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 |||||||| |||||||| | | |||||| |||| ||| | ||| ||||||||||||||| Sbjct 118493 TCGACCGTAAACTGGATAGGCTGAGCAGCAGCCTGGGTACGAAGGTAGTACATGCCGGTC 118434 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 ||||| || ||| ||| || ||| ||||| | || | || |||| | | | || | Sbjct 118433 TTGAGACCGAGC-TTCCAGCCAGTGAAGTGCAT-GCTGGTGATCTTGCCCATTGTGGGGT 118376 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| ||||| |||||| || || ||| || || ||||||| Sbjct 118375 CCTTCATGTGGATGTTCAGAGACTGGGACTGATCAATAAAAGCACCGCGGTCGGCAGCCA 118316 Query 65256 TGTCAATGATACGAC-GTCC----CGATATCTCCCAGACGGTCTTGTACAG-GCGACGTA 65309 | | ||||| |||| || |||||||||||||||||||| || || | | Sbjct 118315 T-----TTGCACGACTGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTG-A 118262 Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369 | || || || | |||| ||| || ||||| | ||||| ||||| || Sbjct 118261 CATCGGCGGGGATGTTGGGGATGTTCTGAACAGAACCGCCCTCGGCAATGATGCGGTTCT 118202 Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAG----ATGTTGAACCAAGTGACGATTG 65425 ||| || ||||| | ||||| |||| ||| || || ||||| | ||| Sbjct 118201 TCATGCTGTCAGACCAGAGACCCATGTCGACAAGGTCCTTGAGGAGCCAAG----GGTTG 118146 Query 65426 ATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCA 65485 | ||| ||||| || || | || |||||||| |||||||| || ||| || ||| Sbjct 118145 ACGACCTGGAAGTCACCTGCGAGCACACGACGCGAGTAGATGTTTGAGGTGTAAGGCTCA 118086 Query 65486 AAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAAC 65545 ||| | || ||||||| ||||| |||| ||| ||||| |||||||| ||||||| | Sbjct 118085 AAGCACTCGTTGTTGCCGAGAATCTGGGAGGTACTGGCAGTAGGCATGGGGGCGACCAGC 118026 Query 65546 AA 65547 || Sbjct 118025 AA 118024 >seq3 Length=3980562 Score = 141 bits (156), Expect = 7e-29 Identities = 292/434 (67%), Gaps = 3/434 (1%) Strand=Plus/Plus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | |||||||||| | || ||||| || | || ||| | ||||| ||| | Sbjct 2739089 GCCTTTGCTGCGGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 2739148 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| || |||||| ||| ||| | || || || |||||| Sbjct 2739149 AAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAG 2739208 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 ||| | || ||| ||||| | || ||| | | || ||| || || Sbjct 2739209 GGCCTCCACACTGACTTTGCCTGCCTCCTGTTCTCCCAC---CTCAAGAACCGCCCCAGC 2739265 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || ||| || | ||||| | || || || | ||||||||||| || || || Sbjct 2739266 AAGAAGCTCGTCGAGGAGATCATCATCGATGCTGTCAAGATCGAACAGGAGTTCCTTACC 2739325 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || ||| ||||| | | || | |||||||| | || ||| |||||| || || Sbjct 2739326 GAGGCTCTGCCCTGCGCCCTGCTTGGCATGAACTCGAACCTCATGAAGCAGTACATCGAG 2739385 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || |||||||| || | |||| | | || | || | |||| | | | ||| Sbjct 2739386 TTCGTCGCCGACCGCCTCCTCGTCGCTCTCGGCAACGAGAAGGTCTACCGTGCCACCAAC 2739445 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || ||||| |||||||| | || || |||| |||||||| || || |||||||| || Sbjct 2739446 CCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGC 2739505 Query 61918 GTAGGCGACTATCA 61931 || ||||| || || Sbjct 2739506 GTCGGCGAGTACCA 2739519 Score = 134 bits (148), Expect = 1e-26 Identities = 235/335 (70%), Gaps = 9/335 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| ||||| | Sbjct 2738608 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCTTTCTGGACTGCCGAGGAGATCGATCTC 2738667 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | | | | |||| | ||| | | ||||| Sbjct 2738668 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGAG-GATGAGAAGTACTTCATCTC 2738726 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | |||| ||||| ||||| |||||||| |||||||| ||||| | | || || Sbjct 2738727 GCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 2738786 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| || | | |||||||| || ||||||||||||||||| | Sbjct 2738787 CTTCA-GCGGCGAGGTCCAGATTCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 2738845 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | ||||| || || ||| ||| ||||| | Sbjct 2738846 TGGAGAACATCCACTCCGAGACCTACTCGCTGCTCATTGACACCTACGTCAAGGAGCCCG 2738905 Query 61382 CGGAACGTGAACGA-TTGTTCAATGCCATCGAGAC 61415 | | || || | | |||||||| ||||| || || Sbjct 2738906 CCCAGCG-GACCCACTTGTTCAACGCCATTGACAC 2738939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567161752720