Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq82 883 0.0 >seq82 Length=17382 Score = 883 bits (978), Expect = 0.0 Identities = 597/665 (90%), Gaps = 3/665 (0%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3721 CCATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 3780 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 3781 AATTTCATCTAAAGCTAAATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 3840 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 3841 AGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 3900 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 ||||| | |||||| ||| || | | ||| ||||| ||| ||||||| ||| | | Sbjct 3901 CTTGCGATCAGACTCGCCTGCGGG-GTTCAGCCGGCAT-TCGTGCCGGTGTACTTCCCCG 3958 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 || | ||||||| || | ||||| || ||| |||||||||||||||||| | |||| | Sbjct 3959 TGGGCGGGCCAGCGTCGGTTCGGGTGGCCGGTCAAAGGCCCCGGGAATGTGTCGCCCTCC 4018 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| || ||||||||||||||| |||||||| ||||||| |||| |||||| |||| Sbjct 4019 GGGGCGTCTTATAGCCCGGGGTGCCATGCGGCCTACCTGGACCGAGGAACGCGCTTCGGC 4078 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 | ||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct 4079 TCGGACGCTGGCGTAATGGTCGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 4138 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||| ||||||||||||||| ||||||| | |||| | |||||| ||||||||||||| Sbjct 4139 CATCTACGCGAGTGTTTGGGTGGCAAACCCATACGCGCAGTGAAAGCGAACGGAGGTGGG 4198 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4199 AACCCTTCGGGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 4258 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 4259 GTAGCTGTGGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 4318 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4319 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 4378 Query 679 GGCGA 683 ||||| Sbjct 4379 GGCGA 4383 Score = 883 bits (978), Expect = 0.0 Identities = 597/665 (90%), Gaps = 3/665 (0%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 12512 CCATGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 12571 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 12572 AATTTCATCTAAAGCTAAATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 12631 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 12632 AGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 12691 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 ||||| | |||||| ||| || | | ||| ||||| ||| ||||||| ||| | | Sbjct 12692 CTTGCGATCAGACTCGCCTGCGGG-GTTCAGCCGGCAT-TCGTGCCGGTGTACTTCCCCG 12749 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 || | ||||||| || | ||||| || ||| |||||||||||||||||| | |||| | Sbjct 12750 TGGGCGGGCCAGCGTCGGTTCGGGTGGCCGGTCAAAGGCCCCGGGAATGTGTCGCCCTCC 12809 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| || ||||||||||||||| |||||||| ||||||| |||| |||||| |||| Sbjct 12810 GGGGCGTCTTATAGCCCGGGGTGCCATGCGGCCTACCTGGACCGAGGAACGCGCTTCGGC 12869 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 | ||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct 12870 TCGGACGCTGGCGTAATGGTCGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 12929 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||| ||||||||||||||| ||||||| | |||| | |||||| ||||||||||||| Sbjct 12930 CATCTACGCGAGTGTTTGGGTGGCAAACCCATACGCGCAGTGAAAGCGAACGGAGGTGGG 12989 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12990 AACCCTTCGGGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 13049 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 13050 GTAGCTGTGGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 13109 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 13110 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 13169 Query 679 GGCGA 683 ||||| Sbjct 13170 GGCGA 13174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079993843850