Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq235 93.3 1e-16 >seq235 Length=29381 Score = 93.3 bits (102), Expect = 1e-16 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || || | ||||||| | |||||| ||| | | ||||||| Sbjct 14668 CAAGTCATCATGGCCTAAATACTGTGGGCTATAGACGTGCCACATACGCCTTAACAAAGG 14727 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||| | |||| | ||| |||||| ||| | | | | | | ||||||||||| Sbjct 14728 GATGCGATATTGCGAAATGGAGCTAATCCCCAAAATTGGATATAATAT-GGATTGTAGTC 14786 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT-GCTACGGTG 484 || |||||||||| ||||| ||||| ||||||||||| |||| ||| | |||||| Sbjct 14787 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCATCGTCACGGTG 14846 Query 485 AAT 487 ||| Sbjct 14847 AAT 14849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503995683520