Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq82 291 1e-76 >seq82 Length=17382 Score = 291 bits (322), Expect = 1e-76 Identities = 221/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2672 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2613 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| |||||||||||| Sbjct 2612 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCTTAAGAAGCCAGC 2554 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 2553 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 2495 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||| Sbjct 2494 AGCAGACAAATCACTCCACCAACTAGGAACGGCCATGCACCACCATCCAAAAGATCAAGA 2435 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 2434 AAGAGCTCTCAATCTGTC 2417 Score = 291 bits (322), Expect = 1e-76 Identities = 221/258 (86%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11463 TACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 11404 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||| | |||||||| |||| || ||| |||||||| |||||||||||| Sbjct 11403 ACCTGTTATTGCCGCGCACTTCCATCGGCTTGA-GCCGATAGTCCCCTTAAGAAGCCAGC 11345 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || | | | || |||||||||| || |||||||||||||||||| ||||| Sbjct 11344 GGCCCGCAAATGCGGACCGGGCTATTTAAG-GGCCGAGGTCTCGTTCGTTATCGCAATTA 11286 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||| Sbjct 11285 AGCAGACAAATCACTCCACCAACTAGGAACGGCCATGCACCACCATCCAAAAGATCAAGA 11226 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 11225 AAGAGCTCTCAATCTGTC 11208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797784647