Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq82 86.0 4e-15 >seq82 Length=17382 Score = 86.0 bits (94), Expect = 4e-15 Identities = 59/64 (92%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 2856 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 2799 Query 109 TAAT 112 |||| Sbjct 2798 TAAT 2795 Score = 86.0 bits (94), Expect = 4e-15 Identities = 59/64 (92%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 11647 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 11590 Query 109 TAAT 112 |||| Sbjct 11589 TAAT 11586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799190660