Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq82 183 4e-44 >seq82 Length=17382 Score = 183 bits (202), Expect = 4e-44 Identities = 158/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2029 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1970 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 1969 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 1911 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| ||| | || |||||||||| Sbjct 1910 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCGGCCGGACCAGTACTCGCG 1851 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 1850 GTGAGGCGGACC 1839 Score = 183 bits (202), Expect = 4e-44 Identities = 158/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 10820 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 10761 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct 10760 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCC-CCCCA 10702 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| ||| | || |||||||||| Sbjct 10701 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCGGCCGGACCAGTACTCGCG 10642 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 10641 GTGAGGCGGACC 10630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198345158