Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq235 80.6 6e-13 >seq235 Length=29381 Score = 80.6 bits (88), Expect = 6e-13 Identities = 111/154 (72%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| || | |||| | |||||| | | |||| || |||| | ||||||||| Sbjct 14205 GAATTTCTGGAGTAGTGATGAAATACTTTGATACCAGAAGGACTGTTAACGGCGAAGGCA 14264 Query 249 GCTTGCTGGACTGTAA---CTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA 305 | | || ||||| ||||| ||||| |||| || |||| ||||| ||||||| Sbjct 14265 TCCTTCTA---TGTAAAAACTGACGTTGAGGGACGAAGGCTTGGGTAGCAAGAAGGATTA 14321 Query 306 GATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 |||||||| |||||||| || | ||| ||||||| Sbjct 14322 GATACCCTAGTAGTCCAAGCAGAAAATGATGAAT 14355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203196546816