Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monascus_20ruber_20[genbank_20GCA_5F900184055.1_202017-07-07] 287 sequences; 24,908,785 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq114 89.7 2e-12 >seq114 Length=402525 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| |||||||| || ||||||| | | ||||||||||| | ||| || || || | Sbjct 166352 CAATGGTCATACGTGACGGAATGGCGTGTGGGTTGATGATCAAGTCGGGAGTCAGACCCT 166293 Query 364485 CAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | ||||||||||||| || | | || ||| ||| |||||| || ||||| ||| | Sbjct 166292 CCCGTGTAAAGGGCATATCCTCCTGCCGGTACG-TGATACCAATAGTACCCTTCTGCCCG 166234 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || ||||| |||||||| ||||| Sbjct 166233 TGACGGGAAGCGAACTTGTCACCAAT 166208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884879468919291