Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq373 271 1e-70 seq14 102 1e-19 >seq373 Length=489 Score = 271 bits (300), Expect = 1e-70 Identities = 200/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 65 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 122 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 123 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 182 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| ||||| | | |||||||| | ||||||||||||||||||| Sbjct 183 ACCCAGACCTTTCGGTCAAGGAAAAAAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 242 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 291 >seq14 Length=1282262 Score = 102 bits (112), Expect = 1e-19 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 33 TTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTAT 92 ||||||| | ||| |||||| | ||| | | |||||| | || |||||||||| | ||| Sbjct 1231387 TTGATGATTTGCGTTTACTAAGTATT-CTTTGTTGAAAAGTAATAATTGCAATGTTTTAT 1231445 Query 93 CCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 ||||| || || || ||| | ||||||| || | |||| |||| | | ||| | Sbjct 1231446 CCCCAATACAATAAAGTTTAACAAGATTATTTAAACTTTTCGGTTAAGGAAAAAAACTTG 1231505 Query 152 TTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT 211 |||| | | | | ||| | || | ||| | ||||||||||||||||| | ||| ||| Sbjct 1231506 TTGATTTTGTTAATATAGTGTGCATACGGTCTAGAACATCTAAGGGCATTATAGATTTGT 1231565 Query 212 TATTGCCTCAAACTT 226 ||||| |||||||| Sbjct 1231566 TATTGTTTCAAACTT 1231580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996321075