Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20aucupariae_20[genbank_20GCA_5F002162555.1_202017-05-31] 505 sequences; 54,948,206 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8 300 1e-76 >seq8 Length=1964072 Score = 300 bits (332), Expect = 1e-76 Identities = 595/873 (68%), Gaps = 7/873 (1%) Strand=Plus/Minus Query 65995 AAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATA 66054 ||| |||| || | | | ||| || | ||| || ||| | ||| || || || | || Sbjct 141170 AAAGTTGGCAAAG-CGATAGAAGCCAAGTTACAACAAGCAACCTCATCTGGCGCAGAGTA 141112 Query 66055 CTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACT 66114 ||||||||| || ||||| | || || ||| || || || | |||| ||| ||||| Sbjct 141111 CTCGACAATCTCTGTGCATAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTACT 141052 Query 66115 CTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTC 66174 ||| ||||||||||| ||||| | |||| | ||| | || ||||| ||||| ||| Sbjct 141051 CTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCCGTCTCGGTTTGGGCCTC 140992 Query 66175 AATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-T 66233 | || | || |||||| | ||||| | || | | | |||| | | | | Sbjct 140991 GAGAATAGAGTACCAAAGCTTTTGAGCCTTGATAGT-CTTGCGACCCTTGCCAGCCTTCT 140933 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 ||||| || ||||| ||||| ||| || | || || | || || ||||| | Sbjct 140932 CGTAACTCTCATAGAGAGCCTCGAACTCTTCGCCATAAACATCTGCCAAACCCGGACATT 140873 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || ||||| || | ||| || |||| || ||| ||||| |||||||||||||| Sbjct 140872 CGTTGGGGCACATAAGAGTCCACTCTCCATTCTTTTCAACACGCTTCATAAATAGATCAG 140813 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | ||||| | ||||||||||||||| ||||| || || || |||| ||||| |||| Sbjct 140812 GAATCCACAAGGCGTAGAAGAGATCACGTGCACGAACTTCTTCCTTGCCATGATTCTTGC 140753 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 ||| || || ||||| || | ||| |||||||||||||| ||||| || ||||| | | Sbjct 140752 GCAGATCAAGAAACTCGAAAACGTCAGCATGCCATGGTTCAAGGTAAATAGCGAAAGCAC 140693 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || || |||||||| || || || | ||| |||||||| || || | || Sbjct 140692 CAGGTCGCTTATTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCA 140633 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || || | ||||| || || || ||||||||| ||||| | || || || | Sbjct 140632 TAGGGACAATGCCGTTGGAGTTTCCGTTGGTGCCGGCGATGTATGCACCAGTAGCACGGA 140573 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC-AATCGGC- 66651 | |||||| || ||||||||||||||||| ||||||| || |||| |||| | Sbjct 140572 TTCTGTGAACGTTGAGACCAATACCACCGGCATTCTTCGAAATCATGGCACAAATCTTCA 140513 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | |||| | | || || ||||| ||| |||| ||| | |||| ||||||| Sbjct 140512 AAGTGTC--GTAAATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGCATGATGA 140455 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 |||||| | || || || | || |||||||| || || | || || || ||||| | Sbjct 140454 AAGTTGTGCTTGTGGAGTTCCCGCAGAGAAGAGTGTCGGGGAGGCATGGGTGAAGTACTT 140395 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 | ||||| | ||||| |||||||| || ||||| | || |||||||| || | Sbjct 140394 GTTTGACATCAAGTTGTATGTCTCGATAGCACTCTCAATATCATCACCATGAATACCAAC 140335 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 ||| ||||| | | | ||| || ||||| Sbjct 140334 GGCAACACGCATGATCATTTGTTGTGGACGTTC 140302 Score = 111 bits (122), Expect = 1e-19 Identities = 309/465 (66%), Gaps = 8/465 (2%) Strand=Plus/Minus Query 65104 AGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAA 65163 ||| ||| |||| | | ||||||||| |||||||| | || |||| || || Sbjct 142044 AGCAGCCATGGTACGTAAATAGTACATTCCGGTCTTCAAACCCAGTTTCCAACCAGCAAA 141985 Query 65164 ATGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGACTGAC 65222 ||||| |||| |||| |||| | | | || || || || || |||| ||| || Sbjct 141984 GTGCATAGATG-TAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATCGATTGGG 141926 Query 65223 TCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCT 65282 ||||||||| | ||||||||| |||||||| | || ||| || || || | Sbjct 141925 ATTGATCGATGAAGGCACCACGATCGGCAGCCATCTGAACGATTGTTCGCTGAGAAATTT 141866 Query 65283 CCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACT 65341 |||| || |||||||| ||| | | | | ||| ||| || | ||||| |||| Sbjct 141865 CCCAAACAGTCTTGTAAAGG-GCCTTGATATCAGCTGGGATATTAGGAATGTTTTGGATG 141807 Query 65342 GAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATA 65401 || || | | || || || || || ||| || ||||| | ||||| ||||| Sbjct 141806 GATCCGCCATCAGCGATGATACGGTTCTTCATGTTGTCCGACCAAAGACCCATATCGACG 141747 Query 65402 AGATG-TTGAACCAAGTGACG-ATTGATGACTTGGAACTCGCCGGACAGTACACGACGGA 65459 || | |||| ||| | | ||||| ||||||||| || || | || |||||||| Sbjct 141746 AGGTCCTTGAG--AAGCCATGGATTGACGACTTGGAATTCTCCAGCAAGAACACGACGAG 141689 Query 65460 CATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAG 65519 || ||||| || ||| ||||| || ||||| || || |||||||||| || Sbjct 141688 AGTAAATGTTTGAAGTGTAAGGTTCGAAACATTCATTGAAACCAAGAATTTGGGATGTGC 141629 Query 65520 ATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGT 65564 |||||||||||||| || || | | ||||| || | ||||| Sbjct 141628 TAGCAGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACTCCGT 141584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565553093200