Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 145 2e-32 seq696 107 6e-21 seq17 98.7 3e-18 seq24 89.7 2e-15 seq11 77.0 1e-11 >seq3 Length=1645291 Score = 145 bits (160), Expect = 2e-32 Identities = 115/138 (83%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||| | || |||| || ||||||||| |||||| |||||| ||||||||||| | Sbjct 574663 GTGCTCATTGCGATCACAAAACACAAAAGAGCACTGTATGAGTATTCATTGTCACTACGT 574722 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||| | ||||||||||||||| ||||||||||||||||| |||| | |||||| Sbjct 574723 TCTCGTGTTGAGATTGGGTAATTTGCTCGCCTGCTGCCTTCCTTAAATGTAGCTGCCGTT 574782 Query 121 TCTCAGGCTCCCTCTCCG 138 |||| ||||| |||||| Sbjct 574783 CCTCACGCTCCTTCTCCG 574800 >seq696 Length=302 Score = 107 bits (118), Expect = 6e-21 Identities = 63/64 (98%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 441 ATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 500 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 59 Query 501 GCAG 504 |||| Sbjct 60 GCAG 63 >seq17 Length=832724 Score = 98.7 bits (108), Expect = 3e-18 Identities = 59/61 (97%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct 816458 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATAG-TTGC 816400 Query 450 T 450 | Sbjct 816399 T 816399 >seq24 Length=742532 Score = 89.7 bits (98), Expect = 2e-15 Identities = 60/66 (91%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 385 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG 444 |||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct 10782 AAGGTACTATTAAATAAACGATAACTGATTTAATAAGCCATTCGCAATTTCATAGTATAG 10723 Query 445 ATTGCT 450 ||||| Sbjct 10722 -TTGCT 10718 >seq11 Length=1281110 Score = 77.0 bits (84), Expect = 1e-11 Identities = 62/74 (84%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 385 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG 444 |||||||||| ||||||||||||| ||||||||| ||||||| ||||||| |||| Sbjct 650562 AAGGTACTATTAAATAAACGATAATTGATTTAATAAGCCATTTATAGTTTCATATTATA- 650504 Query 445 ATTGCTTATACTTA 458 |||||||| || || Sbjct 650503 ATTGCTTAAACCTA 650490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510387222016