Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 2e-32
seq696 107 6e-21
seq17 98.7 3e-18
seq24 89.7 2e-15
seq11 77.0 1e-11
>seq3
Length=1645291
Score = 145 bits (160), Expect = 2e-32
Identities = 115/138 (83%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||| | || |||| || ||||||||| |||||| |||||| ||||||||||| |
Sbjct 574663 GTGCTCATTGCGATCACAAAACACAAAAGAGCACTGTATGAGTATTCATTGTCACTACGT 574722
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||| | ||||||||||||||| ||||||||||||||||| |||| | ||||||
Sbjct 574723 TCTCGTGTTGAGATTGGGTAATTTGCTCGCCTGCTGCCTTCCTTAAATGTAGCTGCCGTT 574782
Query 121 TCTCAGGCTCCCTCTCCG 138
|||| ||||| ||||||
Sbjct 574783 CCTCACGCTCCTTCTCCG 574800
>seq696
Length=302
Score = 107 bits (118), Expect = 6e-21
Identities = 63/64 (98%), Gaps = 1/64 (2%)
Strand=Plus/Plus
Query 441 ATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 500
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 59
Query 501 GCAG 504
||||
Sbjct 60 GCAG 63
>seq17
Length=832724
Score = 98.7 bits (108), Expect = 3e-18
Identities = 59/61 (97%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 816458 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATAG-TTGC 816400
Query 450 T 450
|
Sbjct 816399 T 816399
>seq24
Length=742532
Score = 89.7 bits (98), Expect = 2e-15
Identities = 60/66 (91%), Gaps = 1/66 (2%)
Strand=Plus/Minus
Query 385 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG 444
|||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 10782 AAGGTACTATTAAATAAACGATAACTGATTTAATAAGCCATTCGCAATTTCATAGTATAG 10723
Query 445 ATTGCT 450
|||||
Sbjct 10722 -TTGCT 10718
>seq11
Length=1281110
Score = 77.0 bits (84), Expect = 1e-11
Identities = 62/74 (84%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 385 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG 444
|||||||||| ||||||||||||| ||||||||| ||||||| ||||||| ||||
Sbjct 650562 AAGGTACTATTAAATAAACGATAATTGATTTAATAAGCCATTTATAGTTTCATATTATA- 650504
Query 445 ATTGCTTATACTTA 458
|||||||| || ||
Sbjct 650503 ATTGCTTAAACCTA 650490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510387222016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |