Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq29 239 4e-58 >seq29 Length=608615 Score = 239 bits (264), Expect = 4e-58 Identities = 630/952 (66%), Gaps = 15/952 (2%) Strand=Plus/Plus Query 65995 AAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATA 66054 ||| |||| || | | | ||| || | ||| || ||| | ||| || || || | || Sbjct 545267 AAAGTTGGCAAAG-CGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGTA 545325 Query 66055 CTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACT 66114 ||| || || || ||||||| || || ||| || || || | |||| ||| ||||| Sbjct 545326 CTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTACT 545385 Query 66115 CTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTC 66174 ||| ||||||||||| ||||| | |||| | ||| | || ||||| ||| | ||| Sbjct 545386 CTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCTC 545445 Query 66175 AATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-T 66233 | || | || |||||| | ||||| | || | | | |||| | | | | Sbjct 545446 GAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGT-CTTGCGACCCTTGCCAGCCTTCT 545504 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 ||||| || ||||| || || || || | || || | || || ||||| | Sbjct 545505 CGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGACATT 545564 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 | || ||||| || | ||| || || | || ||| ||||| ||| || ||||||| Sbjct 545565 CATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAG 545624 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | ||||| | ||| ||||||||||| ||||| || || || | || ||||| |||| Sbjct 545625 GAATCCACAAGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATTCTTGC 545684 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | || |||||||| || | |||||||||||||| || ||||| | || || | | Sbjct 545685 GTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCAC 545744 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || ||| ||||||||||| || || | ||| |||||||| || || | || Sbjct 545745 CAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCA 545804 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || || | ||||| || || || ||||| ||| |||| || || || || | Sbjct 545805 TGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGA 545864 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC-AATCGGC- 66651 | ||||| || ||||||||||||||||| |||| ||||| |||| |||| | Sbjct 545865 TTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCA 545924 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | |||| | | || || || || || | || ||| | |||| |||| ||| Sbjct 545925 AAGTGTC--GTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGA 545982 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 |||||| | | || || | || |||||||| || || | || || |||||||| | Sbjct 545983 AAGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTACTT 546042 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 | ||||| ||||||| ||||| ||| || ||||| | || || ||||| || | Sbjct 546043 GTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCGTGAATACCAAC 546102 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCA 66887 ||| ||||| | | | ||| || ||||| | | ||| ||| || | | | Sbjct 546103 CGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCC-ATC---GAGACGTA 546158 Query 66888 TTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | ||| || || || || ||||||| ||| ||||| ||| |||||||| Sbjct 546159 GAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAATC 546210 Score = 91.5 bits (100), Expect = 1e-13 Identities = 304/465 (65%), Gaps = 10/465 (2%) Strand=Plus/Plus Query 65105 GCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAA 65164 || ||| |||| | | ||||||||| |||||||| | || ||| || ||| Sbjct 544394 GCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAGCCAGCAAAA 544453 Query 65165 TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGACTGACT 65223 ||||| |||| | || |||| | | | || || || || || |||| || ||| Sbjct 544454 TGCATAGATG-TGATCTTGCCCATTGTAGGATCTTTCATGTGAATGTTCATAGATTGAGA 544512 Query 65224 CTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCTC 65283 ||||| ||| || ||||||||| |||||||| | || || || || || || Sbjct 544513 TTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACAATTGTTCGCTGGGAGATTTC 544572 Query 65284 CCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACTG 65342 ||| || |||||||| ||| | | | | ||| |||||| | || | |||| | Sbjct 544573 CCAAACAGTCTTGTAAAGG-GCCTTGATGTCAGCTGGAATGTTGGGGATATTTTGGATGG 544631 Query 65343 AACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAA 65402 | |||| | ||||| || || || ||| || ||||| | ||||| ||||| | Sbjct 544632 ATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGACCAGAGACCCATATCGACGA 544691 Query 65403 GATGTT---GAACCAAGTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGA 65459 ||| || ||| | | || | |||| ||| ||||| || || | || |||||||| Sbjct 544692 GATCTTTGAGAAGCCA-TG--GGTTGACGACCTGGAATTCTCCAGCAAGAACACGACGCG 544748 Query 65460 CATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAG 65519 |||||||| || || ||||| || |||| || || || ||||||| || Sbjct 544749 AGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCAAGGATTTGGGATGTGC 544808 Query 65520 ATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGT 65564 ||||||||||| || || || | | ||||| || | ||||| Sbjct 544809 TAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCGT 544853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563900825440