Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq68 91.5 6e-13 seq159 89.7 2e-12 >seq68 Length=154813 Score = 91.5 bits (100), Expect = 6e-13 Identities = 180/264 (68%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 12728 TTGAGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGA 12787 |||| |||||||| ||| || ||||||| ||| ||||||| | ||| || | ||| Sbjct 50715 TTGACGACATCGTAGTAGATGACCCTCATGCCCAGAGACTCTGCCAAGACGGACAGCTGT 50656 Query 12788 GAACCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCT 12847 | ||||| || ||| || || || || |||| ||||||||||| || || | ||| || Sbjct 50655 GCACCAACGTGACCGTATCCGACAATGCCTAATGTCTTTCCTCTTACCTCCCAGCAGCCG 50596 Query 12848 TGAGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGAC-- 12905 || ||||||||| | || | ||| | ||| ||||| | ||| || | ||| | Sbjct 50595 GCCGAGACCTTGTTCCAGACACCGTTGTGCATTTCATTGTTGCGATCACCCATCTGCCTT 50536 Query 12906 GAGAA--AGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAA 12963 | || |||| | ||| || || || ||||||| || | || ||||| || Sbjct 50535 GCCAATGAGATGATGTAG----CCAATCATCTGCTCTGCTACCGAGCGAGAGTTGCTGAA 50480 Query 12964 GGGAGAATTAAAGACTGCAATGCC 12987 ||| || || ||||| || || || Sbjct 50479 GGGTGAGTTGAAGACGGCGATACC 50456 >seq159 Length=43499 Score = 89.7 bits (98), Expect = 2e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 364388 GCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGAGAGGGAATG 364447 || || |||||||| || | ||| || | | | |||| |||||||| ||||||||| Sbjct 10030 GCGCCGACCTTGGAAAGTAGACACTCGATCAAGTGAGCAATTGTCATACGCGAGGGAATG 10089 Query 364448 GAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCG 364507 | | ||||||||||||||||||| || | ||||| || || |||||||| ||||| Sbjct 10090 GCGTGAGGGTTGATGATGATGTCCGGTGTGAGACCGTCTGCTGTGAAGGGCATGTCTTCT 10149 Query 364508 GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCCA 364567 | | | ||| ||| | || ||||| || | | ||||| || ||||| || || Sbjct 10150 TGCCGGTAGGTGATACCGACAGTACCCTTCTGTCCGTGACGAGATGCGAACTTATCACCG 10209 Query 364568 AT 364569 || Sbjct 10210 AT 10211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884874542297463