Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq2333 277 3e-72
seq375 262 6e-68
>seq2333
Length=20116
Score = 277 bits (306), Expect = 3e-72
Identities = 201/229 (88%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| |
Sbjct 8130 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 8187
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 8188 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 8247
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||||||| |||||||| | |||||||||||||||||||
Sbjct 8248 ACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 8307
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8308 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 8356
Score = 194 bits (214), Expect = 3e-47
Identities = 147/171 (86%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 36 ATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCC 95
||||| |||||||||||| ||| |||||||||||| ||| |||||||||| ||||||||
Sbjct 8430 ATGACATGCGCTTACTAGGCATT-CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCC 8488
Query 96 CATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG 154
|| ||||| | ||| | |||||||||| ||||| ||||||||||||| ||||||||
Sbjct 8489 CAGCACGACAGAGTTTAACAAGATTACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTG 8548
Query 155 AATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8549 GCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 8599
>seq375
Length=2232
Score = 262 bits (290), Expect = 6e-68
Identities = 198/229 (86%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| |
Sbjct 563 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 506
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 505 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 446
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| |||| ||||| |||| || |||||||| | |||||||||||||||||||
Sbjct 445 ACCCAAACCTTTCGGCTAAGGAAATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 386
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 385 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751980869590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |