Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq375 841 0.0
seq2333 834 0.0
seq1515 742 0.0
>seq375
Length=2232
Score = 841 bits (932), Expect = 0.0
Identities = 588/658 (89%), Gaps = 12/658 (2%)
Strand=Plus/Plus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 1506
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1507 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 1566
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
|||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||
Sbjct 1567 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTAAAAGGGAAGGGATTGCAAC 1626
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGG 266
||||||||| ||| | || || |||| | | ||||| |||| | ||| | ||||
Sbjct 1627 CAGACTTGCTCGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GCCGCGTTGCAGG 1684
Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326
|||||||| || | || | |||| ||| | ||||||| || |||| ||| |||
Sbjct 1685 CCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAGGAATGTAGCTCCCT--CGGGAGTG 1741
Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
|||||||| ||| |||| || || | || | |||||||||||| |||||||||||
Sbjct 1742 TTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTTCGGCTAGGATG 1798
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
||||||||||||| |||| | |||||||||| ||||||||||||||||||||||||||||
Sbjct 1799 CTGGCGTAATGGTCGTAATCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTAT 1858
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
||||||||| ||||||||||||| | ||||||||||||||||||||||||| |||||
Sbjct 1859 GCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGAGAACC--G 1916
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 CAAGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 1976
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 2036
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2037 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 2094
>seq2333
Length=20116
Score = 834 bits (924), Expect = 0.0
Identities = 582/656 (89%), Gaps = 8/656 (1%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7019 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 6960
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6959 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 6900
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 6899 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCCCGCAAC 6840
Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267
||||||| | || | || || | || | | ||||| |||| | || || ||||
Sbjct 6839 CAGACTTTGCGGC-GGTGTTCGGCTGGTCTTCTGACCGGTTTACTC-GCCGCCGTGAGGC 6782
Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327
|| |||| || || | | |||| ||| || ||||||| || |||||||||| ||||
Sbjct 6781 CATCATCGTCTGGGACCGCTGGAT-AAGACCTAAGGAATGTAGCTCCCTTCGGGGTGTGT 6723
Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387
||||||| |||| |||| || || || | |||||||||||| |||| |||||| |
Sbjct 6722 TATAGCCTCTGGTG--ATGCAGCGCGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGAT 6665
Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447
|||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 6664 GGCGTAATGGTTGTCGGCGGCCCGTCTTGAAACACGGACCAAGGAGTCGAACATCTATGC 6605
Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507
||||||| ||||||||||||| | |||||||||||||||||||||||||||||| |
Sbjct 6604 GAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAAC---TTT 6548
Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 6547 TTGTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTT 6488
Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6487 CGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 6428
Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 6427 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 6372
Score = 329 bits (364), Expect = 1e-87
Identities = 185/187 (99%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7259 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 7200
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7199 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 7140
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7139 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 7080
Query 208 CAGACTT 214
|||||||
Sbjct 7079 CAGACTT 7073
Score = 98.7 bits (108), Expect = 4e-18
Identities = 59/61 (97%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 624 GTGGA-GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 5783 GTGGANGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 5724
Query 683 A 683
|
Sbjct 5723 A 5723
>seq1515
Length=785
Score = 742 bits (822), Expect = 0.0
Identities = 531/605 (88%), Gaps = 7/605 (1%)
Strand=Plus/Minus
Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 785 AAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 726
Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 725 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 666
Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258
|||||||||||||||| || | || || | || | | ||||| |||| ||
Sbjct 665 GCTTGCAACCAGACTTCGTAGC-GATGTTCCGCTGGTCTTCTGACCGGTCTACTCATCGT 607
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|| |||||| |||| || || | | |||||| | || ||||||| || || ||
Sbjct 606 CGCG-AGGCCAACATCGTCTGGGACCGCTGGATAA-GACCTAAGGAATGTAGCTTCCCTC 549
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
||| ||||||||||| | |||| |||| || | || | |||||||||||| ||||
Sbjct 548 GGGAAGTGTTATAGCCTGTGGTG--ATGCAGCGTGTCTCGGGCGAGGTCCGCGCTTCGGC 491
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
|||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 490 AAGGATGTTGGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 431
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||
Sbjct 430 CATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGG 371
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
|| | | | ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 370 AAGCGC--AAGCTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGC 313
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 312 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 253
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 252 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 193
Query 679 GGCGA 683
|||||
Sbjct 192 GGCGA 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079943672300
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