Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq375 841 0.0 seq2333 834 0.0 seq1515 742 0.0 >seq375 Length=2232 Score = 841 bits (932), Expect = 0.0 Identities = 588/658 (89%), Gaps = 12/658 (2%) Strand=Plus/Plus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1447 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 1506 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1507 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 1566 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| Sbjct 1567 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTAAAAGGGAAGGGATTGCAAC 1626 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGG 266 ||||||||| ||| | || || |||| | | ||||| |||| | ||| | |||| Sbjct 1627 CAGACTTGCTCGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GCCGCGTTGCAGG 1684 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||| || | || | |||| ||| | ||||||| || |||| ||| ||| Sbjct 1685 CCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAGGAATGTAGCTCCCT--CGGGAGTG 1741 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| ||| |||| || || | || | |||||||||||| ||||||||||| Sbjct 1742 TTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTTCGGCTAGGATG 1798 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||||||||||| |||| | |||||||||| |||||||||||||||||||||||||||| Sbjct 1799 CTGGCGTAATGGTCGTAATCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTAT 1858 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||| Sbjct 1859 GCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGAGAACC--G 1916 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1917 CAAGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 1976 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1977 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 2036 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2037 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 2094 >seq2333 Length=20116 Score = 834 bits (924), Expect = 0.0 Identities = 582/656 (89%), Gaps = 8/656 (1%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7019 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 6960 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6959 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 6900 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 6899 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCCCGCAAC 6840 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267 ||||||| | || | || || | || | | ||||| |||| | || || |||| Sbjct 6839 CAGACTTTGCGGC-GGTGTTCGGCTGGTCTTCTGACCGGTTTACTC-GCCGCCGTGAGGC 6782 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 || |||| || || | | |||| ||| || ||||||| || |||||||||| |||| Sbjct 6781 CATCATCGTCTGGGACCGCTGGAT-AAGACCTAAGGAATGTAGCTCCCTTCGGGGTGTGT 6723 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 ||||||| |||| |||| || || || | |||||||||||| |||| |||||| | Sbjct 6722 TATAGCCTCTGGTG--ATGCAGCGCGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGAT 6665 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 6664 GGCGTAATGGTTGTCGGCGGCCCGTCTTGAAACACGGACCAAGGAGTCGAACATCTATGC 6605 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507 ||||||| ||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct 6604 GAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAAC---TTT 6548 Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 6547 TTGTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTT 6488 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6487 CGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 6428 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 6427 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 6372 Score = 329 bits (364), Expect = 1e-87 Identities = 185/187 (99%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7259 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 7200 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7199 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 7140 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7139 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 7080 Query 208 CAGACTT 214 ||||||| Sbjct 7079 CAGACTT 7073 Score = 98.7 bits (108), Expect = 4e-18 Identities = 59/61 (97%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 624 GTGGA-GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 5783 GTGGANGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 5724 Query 683 A 683 | Sbjct 5723 A 5723 >seq1515 Length=785 Score = 742 bits (822), Expect = 0.0 Identities = 531/605 (88%), Gaps = 7/605 (1%) Strand=Plus/Minus Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 785 AAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 726 Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 725 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 666 Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258 |||||||||||||||| || | || || | || | | ||||| |||| || Sbjct 665 GCTTGCAACCAGACTTCGTAGC-GATGTTCCGCTGGTCTTCTGACCGGTCTACTCATCGT 607 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 || |||||| |||| || || | | |||||| | || ||||||| || || || Sbjct 606 CGCG-AGGCCAACATCGTCTGGGACCGCTGGATAA-GACCTAAGGAATGTAGCTTCCCTC 549 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 ||| ||||||||||| | |||| |||| || | || | |||||||||||| |||| Sbjct 548 GGGAAGTGTTATAGCCTGTGGTG--ATGCAGCGTGTCTCGGGCGAGGTCCGCGCTTCGGC 491 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 490 AAGGATGTTGGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 431 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct 430 CATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGG 371 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 || | | | ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 370 AAGCGC--AAGCTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGC 313 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 253 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 252 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 193 Query 679 GGCGA 683 ||||| Sbjct 192 GGCGA 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079943672300