Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq2479 84.2 3e-14
seq2000 84.2 3e-14
seq1966 84.2 3e-14
>seq2479
Length=3932
Score = 84.2 bits (92), Expect = 3e-14
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||||| |||| |||||||||||||| | || |||||||| |||||||| | ||| |
Sbjct 2371 TGGCACACCTTATCCCGAAGTTACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATC 2430
Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225
| |||||||| ||||||||||| ||
Sbjct 2431 TCAAACGCCTTTGTATTCTCTACTTG 2456
>seq2000
Length=16744
Score = 84.2 bits (92), Expect = 3e-14
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||||| |||| |||||||||||||| | || |||||||| |||||||| | ||| |
Sbjct 14374 TGGCACACCTTATCCCGAAGTTACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATC 14315
Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225
| |||||||| ||||||||||| ||
Sbjct 14314 TCAAACGCCTTTGTATTCTCTACTTG 14289
>seq1966
Length=36277
Score = 84.2 bits (92), Expect = 3e-14
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199
|||||| |||| |||| ||||||||| | ||||||||||| |||||||| | ||| ||
Sbjct 26871 TGGCACACCTTATCCCTAAGTTACGGTGTCATTTTGCCGAGTTCCTTAATGATTGTTAAC 26812
Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225
| |||||||| |||| |||||| ||
Sbjct 26811 TCAAACGCCTTTGTATACTCTACTTG 26786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694382334898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |