Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq2479 84.2 3e-14 seq2000 84.2 3e-14 seq1966 84.2 3e-14 >seq2479 Length=3932 Score = 84.2 bits (92), Expect = 3e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||||||||||||| | || |||||||| |||||||| | ||| | Sbjct 2371 TGGCACACCTTATCCCGAAGTTACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATC 2430 Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225 | |||||||| ||||||||||| || Sbjct 2431 TCAAACGCCTTTGTATTCTCTACTTG 2456 >seq2000 Length=16744 Score = 84.2 bits (92), Expect = 3e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||||||||||||| | || |||||||| |||||||| | ||| | Sbjct 14374 TGGCACACCTTATCCCGAAGTTACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATC 14315 Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225 | |||||||| ||||||||||| || Sbjct 14314 TCAAACGCCTTTGTATTCTCTACTTG 14289 >seq1966 Length=36277 Score = 84.2 bits (92), Expect = 3e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||| ||||||||| | ||||||||||| |||||||| | ||| || Sbjct 26871 TGGCACACCTTATCCCTAAGTTACGGTGTCATTTTGCCGAGTTCCTTAATGATTGTTAAC 26812 Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225 | |||||||| |||| |||||| || Sbjct 26811 TCAAACGCCTTTGTATACTCTACTTG 26786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694382334898