Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1966 98.7 3e-18
seq2479 96.9 9e-18
seq2000 96.9 9e-18
>seq1966
Length=36277
Score = 98.7 bits (108), Expect = 3e-18
Identities = 281/424 (66%), Gaps = 20/424 (5%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 27204 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 27145
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | ||||| ||| |||||||||||||
Sbjct 27144 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGA 27085
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTT---CGCGTT 179
|| | || | || ||||||| || | |||| ||| |||| ||||| ||
Sbjct 27084 CCCTCATCGGTAAGGCCGCCATTGATTGGGGTTTCCTTCAAAACCTAGCTTATATTAGTC 27025
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
||||| | |||||| || || |||||| |||||| | |||| | | |
Sbjct 27024 GGCTAAGAATCTTCGTTAACCAGCCAACATTGGGCAGAATTCACACTCAATACTTTGATT 26965
Query 240 T-TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG--CAGCGGCCTGGTAT-CT 294
| || | || |||| |||||| |||||| | |||||||||| || | | ||| |
Sbjct 26964 TGTCATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCACTCTATGCC 26905
Query 295 TCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAA 354
|| | | | | |||| | | ||| | | ||| |||||| |||| ||
Sbjct 26904 TC--CTATCCTTAACTTA-----ATATTACTT-AAGAAGAATGGCACACCTTATCCCTAA 26853
Query 355 GTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCT 414
||||||||| | ||||||| |||||||| ||| ||||| |||||| |||| ||
Sbjct 26852 GTTACGGTGTCATTTTGCCGAGTTCCTTAATGATTGTTAACTCAAACGCCTTTGTATACT 26793
Query 415 CTAC 418
||||
Sbjct 26792 CTAC 26789
>seq2479
Length=3932
Score = 96.9 bits (106), Expect = 9e-18
Identities = 276/421 (66%), Gaps = 30/421 (7%)
Strand=Plus/Plus
Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69
|||| |||| ||||| ||| ||||||||||||| | | |||||||| |||
Sbjct 2051 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 2110
Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129
|||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||||
Sbjct 2111 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 2170
Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTCGCGTTA----G 181
| || | || ||||||| || | |||| ||| |||| ||| | | ||||
Sbjct 2171 TCATCGGTAAGGCCGCCATTGATTGGGGGTTCCTTCAAAACCTAGCCTAGTGTTATTTGA 2230
Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240
|||| || |||||| || || |||||| |||||| | |||| | | ||
Sbjct 2231 CTAAGAAAATTCGTTAACCAGCCAACATTGGGCAGAAATCACACTCAATACTTTGATTTA 2290
Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG--CAGCGGCCTGGTATCTTCG 297
| | || |||| |||||| |||||| | |||||||||| || | | | |||
Sbjct 2291 TTATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCATTTTAT----- 2345
Query 298 ACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357
| | ||| | | ||| | | | ||| |||||| ||||||||||
Sbjct 2346 ----GTCTCCTCTT--------ATTACTTAATAAT-AATGGCACACCTTATCCCGAAGTT 2392
Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417
|||| | | |||||| |||||||| ||| |||||| |||||| ||||||||||
Sbjct 2393 ACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATCTCAAACGCCTTTGTATTCTCTA 2452
Query 418 C 418
|
Sbjct 2453 C 2453
>seq2000
Length=16744
Score = 96.9 bits (106), Expect = 9e-18
Identities = 276/421 (66%), Gaps = 30/421 (7%)
Strand=Plus/Minus
Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69
|||| |||| ||||| ||| ||||||||||||| | | |||||||| |||
Sbjct 14694 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 14635
Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129
|||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||||
Sbjct 14634 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 14575
Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTCGCGTTA----G 181
| || | || ||||||| || | |||| ||| |||| ||| | | ||||
Sbjct 14574 TCATCGGTAAGGCCGCCATTGATTGGGGGTTCCTTCAAAACCTAGCCTAGTGTTATTTGA 14515
Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240
|||| || |||||| || || |||||| |||||| | |||| | | ||
Sbjct 14514 CTAAGAAAATTCGTTAACCAGCCAACATTGGGCAGAAATCACACTCAATACTTTGATTTA 14455
Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG--CAGCGGCCTGGTATCTTCG 297
| | || |||| |||||| |||||| | |||||||||| || | | | |||
Sbjct 14454 TTATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCATTTTAT----- 14400
Query 298 ACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357
| | ||| | | ||| | | | ||| |||||| ||||||||||
Sbjct 14399 ----GTCTCCTCTT--------ATTACTTAATAAT-AATGGCACACCTTATCCCGAAGTT 14353
Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417
|||| | | |||||| |||||||| ||| |||||| |||||| ||||||||||
Sbjct 14352 ACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATCTCAAACGCCTTTGTATTCTCTA 14293
Query 418 C 418
|
Sbjct 14292 C 14292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260766891392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |