Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1966 82.4 2e-13 >seq1966 Length=36277 Score = 82.4 bits (90), Expect = 2e-13 Identities = 251/384 (65%), Gaps = 33/384 (9%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||| | || ||||||||| ||||||| Sbjct 27196 ATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAA 27137 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| | || Sbjct 27136 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTCATC 27077 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GCTTCGATTGCTC---TAAC 180 | || ||||||| || | ||||| || |||| || |||| ||| || ||| Sbjct 27076 GGTAAGGCCGCCATTGATTGGGGTTTCC-TTCAAAACCTAGCTTATATTAGTCGGCTAAG 27018 Query 181 AGATCCCC-TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA- 238 | ||| | |||||| ||| || |||||| ||| | |||| | | ||| | Sbjct 27017 A-ATCTTCGTTAACCAGCCAACATTGGGCAGAATTCACACTCAATACTTTGATTTGTCAT 26959 Query 239 CTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGT 297 |||| ||| | || |||||| |||||||||| | | ||| ||| ||| | Sbjct 26958 CTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCACTCTATGCCTCCTAT 26899 Query 298 CAT--------------------AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATT 337 | | ||| ||||| |||| |||||||||||||| |||||| Sbjct 26898 CCTTAACTTAATATTACTTAAGAAGAATGGCACACCTTATCCCTAAGTTACGGTGTCATT 26839 Query 338 TTGCCGAGTTCCTTAACAATAGTT 361 |||||||||||||||| || ||| Sbjct 26838 TTGCCGAGTTCCTTAATGATTGTT 26815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062372101376