Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq1966 82.4 2e-13
>seq1966
Length=36277
Score = 82.4 bits (90), Expect = 2e-13
Identities = 251/384 (65%), Gaps = 33/384 (9%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||| | || ||||||||| |||||||
Sbjct 27196 ATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAA 27137
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| | ||
Sbjct 27136 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTCATC 27077
Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GCTTCGATTGCTC---TAAC 180
| || ||||||| || | ||||| || |||| || |||| ||| || |||
Sbjct 27076 GGTAAGGCCGCCATTGATTGGGGTTTCC-TTCAAAACCTAGCTTATATTAGTCGGCTAAG 27018
Query 181 AGATCCCC-TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA- 238
| ||| | |||||| ||| || |||||| ||| | |||| | | ||| |
Sbjct 27017 A-ATCTTCGTTAACCAGCCAACATTGGGCAGAATTCACACTCAATACTTTGATTTGTCAT 26959
Query 239 CTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGT 297
|||| ||| | || |||||| |||||||||| | | ||| ||| ||| |
Sbjct 26958 CTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCACTCTATGCCTCCTAT 26899
Query 298 CAT--------------------AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATT 337
| | ||| ||||| |||| |||||||||||||| ||||||
Sbjct 26898 CCTTAACTTAATATTACTTAAGAAGAATGGCACACCTTATCCCTAAGTTACGGTGTCATT 26839
Query 338 TTGCCGAGTTCCTTAACAATAGTT 361
|||||||||||||||| || |||
Sbjct 26838 TTGCCGAGTTCCTTAATGATTGTT 26815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062372101376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |