Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq375 361 9e-98
seq2333 264 2e-68
>seq375
Length=2232
Score = 361 bits (400), Expect = 9e-98
Identities = 235/257 (91%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 359
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 358 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 300
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| ||| || | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 299 ACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 240
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 239 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 180
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 179 AGAGCTCTCAATCTGTC 163
>seq2333
Length=20116
Score = 264 bits (292), Expect = 2e-68
Identities = 178/198 (90%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 9010 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 9068
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| ||| || | ||||||||||||||||||||||||||||||||||| |||||
Sbjct 9069 GACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 9128
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 9129 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 9188
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 9189 AAGAGCTCTCAATCTGTC 9206
Score = 199 bits (220), Expect = 6e-49
Identities = 138/155 (89%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8275 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 8334
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| | |||| ||||||||||||||||||| ||
Sbjct 8335 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCGGCG 8393
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTA 156
||| ||| || | |||||||||||||||||
Sbjct 8394 ACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTA 8428
Score = 138 bits (152), Expect = 2e-30
Identities = 84/89 (94%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 170 TATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCA 229
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9299 TATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCA 9358
Query 230 TAGAATCAAGAAAGAGCTATCAATCTGTC 258
| ||||||||||||||| ||||||||||
Sbjct 9359 CAAAATCAAGAAAGAGCTCTCAATCTGTC 9387
Score = 98.7 bits (108), Expect = 2e-18
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8541 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 8599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796779729906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |