Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2333 518 6e-145
seq2478 253 3e-65
>seq2333
Length=20116
Score = 518 bits (574), Expect = 6e-145
Identities = 292/295 (99%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3474 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 3533
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3534 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 3593
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3594 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 3653
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3654 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 3713
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3714 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 3768
Score = 210 bits (232), Expect = 4e-52
Identities = 116/116 (100%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17122 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 17181
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17182 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 17237
Score = 163 bits (180), Expect = 5e-38
Identities = 94/95 (99%), Gaps = 1/95 (1%)
Strand=Plus/Plus
Query 202 CAGTT-ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17895 CAGTTCATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 17954
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||
Sbjct 17955 GATCGATAGGCCACACTTTCATGGTTTGTATTCAC 17989
Score = 152 bits (168), Expect = 9e-35
Identities = 89/92 (97%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 16598 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 16657
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 16658 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 16689
>seq2478
Length=3934
Score = 253 bits (280), Expect = 3e-65
Identities = 143/145 (99%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3790 TACTAAGCGGAATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 3849
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3850 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 3909
Query 121 ATTCTGCTTCGGTATGATAGGAAGA 145
|||||||||||||||||||||||||
Sbjct 3910 ATTCTGCTTCGGTATGATAGGAAGA 3934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854377563456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |