Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq2333 529 3e-148
seq375 522 5e-146
>seq2333
Length=20116
Score = 529 bits (586), Expect = 3e-148
Identities = 296/298 (99%), Gaps = 0/298 (0%)
Strand=Plus/Minus
Query 31 TAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCG 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8428 TAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCG 8369
Query 91 GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8368 GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG 8309
Query 151 CCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGG 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8308 CCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGG 8249
Query 211 TAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8248 TAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 8189
Query 271 GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 8188 GGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTGCCCTTTGTA 8131
Score = 302 bits (334), Expect = 9e-80
Identities = 169/170 (99%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8599 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 8540
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8539 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 8480
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCAT 295
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 8479 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCAT 8430
Score = 187 bits (206), Expect = 5e-45
Identities = 105/106 (99%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9115 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 9056
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9055 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 9010
>seq375
Length=2232
Score = 522 bits (578), Expect = 5e-146
Identities = 301/309 (97%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 313
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 314 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 373
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 374 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATTTCCTTAGCCG 433
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 AAAGGTTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 493
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 494 CTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTG 553
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 554 CCCTTTGTA 562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947175126528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |