Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq2333 895 0.0
seq1993 343 5e-92
>seq2333
Length=20116
Score = 895 bits (992), Expect = 0.0
Identities = 521/537 (97%), Gaps = 3/537 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3800 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 3859
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3860 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 3919
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3920 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 3979
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 3980 TTAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 4036
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||| | | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 4037 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 4096
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4097 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 4156
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4157 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 4216
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4217 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 4276
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4277 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 4333
Score = 493 bits (546), Expect = 4e-137
Identities = 298/314 (95%), Gaps = 3/314 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18021 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 18080
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18081 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 18140
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18141 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 18200
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||||||||||||||||||||||||||| |||||||| |||||| | ||
Sbjct 18201 TTAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCCCCTA 18257
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||| | | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 18258 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 18317
Query 307 TTTCCCCGCTGATT 320
||||||||||||||
Sbjct 18318 TTTCCCCGCTGATT 18331
Score = 441 bits (488), Expect = 2e-121
Identities = 246/247 (99%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 19152 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 19211
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19212 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 19271
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19272 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 19331
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19332 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 19391
Query 537 CTTTCTG 543
|||||||
Sbjct 19392 CTTTCTG 19398
Score = 378 bits (418), Expect = 2e-102
Identities = 231/245 (94%), Gaps = 3/245 (1%)
Strand=Plus/Plus
Query 53 ACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18333 ACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 18392
Query 113 CATCAACCCGGATCGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18393 CATCAACCCGGATCGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAG 18452
Query 173 TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAA 232
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 18453 TTCCGCTTCATTGATTAAGTAAAAAAACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA 18512
Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
|||||||| ||||||||||| | | ||| |||||||| ||| |||||||||||||
Sbjct 18513 ---GCTCCCACCTATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGC 18569
Query 293 TCAAC 297
|||||
Sbjct 18570 TCAAC 18574
Score = 286 bits (316), Expect = 1e-74
Identities = 160/161 (99%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 18957 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 19016
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19017 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 19076
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
|||||||||||||||||||||||||||||||||||||||||
Sbjct 19077 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 19117
>seq1993
Length=16890
Score = 343 bits (380), Expect = 5e-92
Identities = 192/193 (99%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 16890 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACCCCTGCGTTATGGTTTAACAGATGT 16831
Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16830 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGA 16771
Query 140 CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaa 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16770 CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTAAAAAAA 16711
Query 200 CGATAAGGGTAGT 212
|||||||||||||
Sbjct 16710 CGATAAGGGTAGT 16698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635157059648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |