Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq635 282 3e-71
seq2106 223 3e-53
seq668 82.4 6e-11
>seq635
Length=74236
Score = 282 bits (312), Expect = 3e-71
Identities = 567/833 (68%), Gaps = 7/833 (1%)
Strand=Plus/Plus
Query 65999 TTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCG 66058
|||||| | || | || || |||||||||||||| | ||| || ||||||| |||||
Sbjct 35083 TTGGGA-GAGCGATCGAAGCCAGGTTGCAGACAGCGACCTCATCTGGAGCGGAGTACTCA 35141
Query 66059 ACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTG 66118
| || || ||||| || || || ||| || ||||| | |||| || || ||||||
Sbjct 35142 ATGATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTG 35201
Query 66119 CGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATG 66178
|| ||||| ||||||||||||| ||| | || ||| ||||| || | ||||| |
Sbjct 35202 CGGTTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGG 35261
Query 66179 ATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTA 66237
||||||| ||||| |||| || || | || ||| | |||| | |||||
Sbjct 35262 ATGGCGTACCAAATCTTCTGTGCGCGGACAGT-CTCACGGCCACGGCCTTGCTTCTCGTA 35320
Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297
|| ||||| || | |||||| || || | || |||| |||| || |||| |
Sbjct 35321 CTGCTCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATT 35380
Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357
|| ||||| || | ||| || || | || || ||||| ||| || ||||| || ||
Sbjct 35381 GGGGCACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGAT 35440
Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417
||| || ||| |||| || || || || || || || |||||||||||||||| |
Sbjct 35441 CCAAAGTGCGAAGAAAAGGTCACGAGCGCGGACTTCTTCCTTGCCGTGATTTTTGCGGAG 35500
Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477
||| | ||| | |||| || || |||||||| || ||||||||||| || | ||
Sbjct 35501 GTCCATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGG 35560
Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537
|| || |||||| ||||| ||||||||||| |||||| ||||||| | ||| ||
Sbjct 35561 GCGCTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGG 35620
Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597
|| || ||||| ||| |||| || ||||| |||| || || || || ||
Sbjct 35621 AACCAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAGCCAGTCGCGCGGATGCG 35680
Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACT 66655
||| || || |||||||| || || || |||| ||||| |||||| || | | |
Sbjct 35681 GTGGACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGT 35740
Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715
||| | | || || || ||| |||| |||| ||| | | ||||||| ||
Sbjct 35741 GTC--GTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGC 35798
Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775
|| | || || || | || ||| || ||||| | |||||| || ||||| | |
Sbjct 35799 TGAGCATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTG 35858
Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828
|||||||| ||||| ||||| || | || ||||| | || || || || ||
Sbjct 35859 GACATGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCC 35911
>seq2106
Length=142898
Score = 223 bits (246), Expect = 3e-53
Identities = 569/854 (67%), Gaps = 18/854 (2%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| || || ||||| ||||||||||| | |||||| | ||| ||
Sbjct 23206 ATATGGCAGATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTG 23265
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT---GAACAACATTTCATTAAA 61203
||||| ||| | | |||||| | || || || | || | | | ||||| |
Sbjct 23266 TCCAAGGACCTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCA 23325
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| || | || ||||| ||||| || || || || ||||| ||||| | | || |||
Sbjct 23326 CACGTCCTTGCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAGCGT 23385
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| |||| || || || | | || || || || |||||||| |||||||| ||
Sbjct 23386 TTC-AGCAGTGAAGTACAGATACCTGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 23444
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| |||||||||| | ||| | || ||||| || |||||||| || |
Sbjct 23445 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAA 23504
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGC 61439
| | || | | ||||| |||||||| | || || || | || ||| ||
Sbjct 23505 GCAGCGATCATATCTCTTCAACGCCATCGATAACATCCC--ATGT-ATCCGTAAGAAGGC 23561
Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGC 61499
|| ||||| || |||||| | | | | || |||| ||| || | ||
Sbjct 23562 TGACTGGGCATTGCGATGGATCTCTGACAAGAATTCGACCTTTGCCTGCCGACTGATCGC 23621
Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559
|| || | ||||||||| | || ||| ||| ||||| || | ||||| ||||||||
Sbjct 23622 TTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTGAA 23681
Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619
||| ||||| || ||| ||||||| || ||| || || ||||| || || ||||||||
Sbjct 23682 GAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGG 23741
Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAA-TCGTCCGTCGG 61678
|||||| || || || |||| ||| | | || ||| | | | ||
Sbjct 23742 CATGCACACAGACTTCGCGTGCCTGCTGTTC---TCCCACCTCAAGAACAAGCCGGACGC 23798
Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
| | | || | ||| | |||| ||||| || | || || || ||||| || ||
Sbjct 23799 ATCA-CTCGT-GCAGAGCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCACA 23856
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
|| || | |||||| ||| ||||||||||| || |||| ||||| || ||
Sbjct 23857 GATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAG 23916
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857
||||| || |||||||||||| | | | || | || | |||| || | | |||
Sbjct 23917 TTTGTCGCAGACCGTCTGTTGTTGGCACTCGGCAACCAGAAGTTCTACAACGCCACCAAC 23976
Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917
||||| || |||||||| | ||||| || | |||||||| || ||||||||||| |||
Sbjct 23977 CCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGT 24036
Query 61918 GTAGGCGACTATCA 61931
|| || ||||| ||
Sbjct 24037 GTTGGTGACTACCA 24050
>seq668
Length=263430
Score = 82.4 bits (90), Expect = 6e-11
Identities = 143/203 (70%), Gaps = 5/203 (2%)
Strand=Plus/Minus
Query 9147 TTGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCAT 9206
|||||||| |||| || ||||| ||| ||||||| || || |||| || |||||
Sbjct 247737 TTGGGCCCG-TTTATGGCTTCCAATGGAGACATTTTGGCGCCGAATACAAGGACTGTCAC 247679
Query 9207 ACGGACTATACGGGCCAAGGTGTGGATCAG-TTGGCGCAATG-TATGCATCAGATCCAAT 9264
|| ||||| || || ||||| || |||||| ||| || | || ||| | || | |
Sbjct 247678 ACCGACTACACCGGACAAGGCGTCGATCAGCTTGCCGAAGTGATATCAA--AGCTGAAGA 247621
Query 9265 ATGAGCCGAGTAGTCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGA 9324
| || ||| ||||||||| ||| | | ||||||||| || || || | || |
Sbjct 247620 ACGATCCGTACGATCGACGCATCATTCTCAGTGCCTGGAACCCAGCAGACCTGAAGAAAA 247561
Query 9325 TGGTATTGCCGCCATGCCATATG 9347
||| | | |||||||||||||||
Sbjct 247560 TGGCACTTCCGCCATGCCATATG 247538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397555276084640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |