Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq635 282 3e-71 seq2106 223 3e-53 seq668 82.4 6e-11 >seq635 Length=74236 Score = 282 bits (312), Expect = 3e-71 Identities = 567/833 (68%), Gaps = 7/833 (1%) Strand=Plus/Plus Query 65999 TTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCG 66058 |||||| | || | || || |||||||||||||| | ||| || ||||||| ||||| Sbjct 35083 TTGGGA-GAGCGATCGAAGCCAGGTTGCAGACAGCGACCTCATCTGGAGCGGAGTACTCA 35141 Query 66059 ACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTG 66118 | || || ||||| || || || ||| || ||||| | |||| || || |||||| Sbjct 35142 ATGATCTCAGTGCAGAGGTTGGAGCTGCGGATTGTGCCAAGGTTCTTCTGGTTGCTCTTG 35201 Query 66119 CGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATG 66178 || ||||| ||||||||||||| ||| | || ||| ||||| || | ||||| | Sbjct 35202 CGGTTGCAAGCATCCTTGTACAGGATGAAAGGGCCGCCAGTCTCGGTCTGAGCCTCAAGG 35261 Query 66179 ATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTA 66237 ||||||| ||||| |||| || || | || ||| | |||| | ||||| Sbjct 35262 ATGGCGTACCAAATCTTCTGTGCGCGGACAGT-CTCACGGCCACGGCCTTGCTTCTCGTA 35320 Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297 || ||||| || | |||||| || || | || |||| |||| || |||| | Sbjct 35321 CTGCTCGTAAAGCTTTTCGAACTCCTCGCCGTAGACATCGGCGAGACCAGGGCACTCATT 35380 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 || ||||| || | ||| || || | || || ||||| ||| || ||||| || || Sbjct 35381 GGGGCACATGAGGGTCCATTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCTGGGAT 35440 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| || ||| |||| || || || || || || || |||||||||||||||| | Sbjct 35441 CCAAAGTGCGAAGAAAAGGTCACGAGCGCGGACTTCTTCCTTGCCGTGATTTTTGCGGAG 35500 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 ||| | ||| | |||| || || |||||||| || ||||||||||| || | || Sbjct 35501 GTCCATGAAGGCCAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCAGG 35560 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || || |||||| ||||| ||||||||||| |||||| ||||||| | ||| || Sbjct 35561 GCGCTTATTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGGAGCATGGG 35620 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 || || ||||| ||| |||| || ||||| |||| || || || || || Sbjct 35621 AACCAGTCCGTTGGATGTGCCGTTCGTGCCTCCGATATACGAGCCAGTCGCGCGGATGCG 35680 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACT 66655 ||| || || |||||||| || || || |||| ||||| |||||| || | | | Sbjct 35681 GTGGACGTTGAGACCAATGCCTCCTGCGTTCTTTGAGATCATGGCACAAGTCTTGAGAGT 35740 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715 ||| | | || || || ||| |||| |||| ||| | | ||||||| || Sbjct 35741 GTC--GTAGATACCCTCGATGCTGTCATCCTTCATGTCGACCAAAAAGCATGAGGCGAGC 35798 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 || | || || || | || ||| || ||||| | |||||| || ||||| | | Sbjct 35799 TGAGCATTAGGCGTACCAGCGCTGAAAAGCGTGGGCGAAGCGTGTGTGAAGTACTTGTTG 35858 Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 |||||||| ||||| ||||| || | || ||||| | || || || || || Sbjct 35859 GACATGTAGTTGTAGGTCTCAATAGCGGCCTCAATATCCTCACCGTGGATGCC 35911 >seq2106 Length=142898 Score = 223 bits (246), Expect = 3e-53 Identities = 569/854 (67%), Gaps = 18/854 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| || || ||||| ||||||||||| | |||||| | ||| || Sbjct 23206 ATATGGCAGATGTACAAGAAAGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATTGATCTG 23265 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT---GAACAACATTTCATTAAA 61203 ||||| ||| | | |||||| | || || || | || | | | ||||| | Sbjct 23266 TCCAAGGACCTTCACGACTGGAACAAGAGATTGAACGATGACGAGCGATACTTCATCTCA 23325 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || || | || ||||| ||||| || || || || ||||| ||||| | | || ||| Sbjct 23326 CACGTCCTTGCTTTCTTCGCCGCATCTGATGGAATTGTCAACGAGAACCTGGTTGAGCGT 23385 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| |||| || || || | | || || || || |||||||| |||||||| || Sbjct 23386 TTC-AGCAGTGAAGTACAGATACCTGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 23444 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||||||||| | ||| | || ||||| || |||||||| || | Sbjct 23445 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAA 23504 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGC 61439 | | || | | ||||| |||||||| | || || || | || ||| || Sbjct 23505 GCAGCGATCATATCTCTTCAACGCCATCGATAACATCCC--ATGT-ATCCGTAAGAAGGC 23561 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGC 61499 || ||||| || |||||| | | | | || |||| ||| || | || Sbjct 23562 TGACTGGGCATTGCGATGGATCTCTGACAAGAATTCGACCTTTGCCTGCCGACTGATCGC 23621 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | ||||||||| | || ||| ||| ||||| || | ||||| |||||||| Sbjct 23622 TTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGGTCGTTCGCGTCCATCTTCTGGTTGAA 23681 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| || ||| ||||||| || ||| || || ||||| || || |||||||| Sbjct 23682 GAAGCGTGGTCTCATGGCCGGTCTCACGTTCTCGAACGAATTGATCTCGCGTGACGAGGG 23741 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAA-TCGTCCGTCGG 61678 |||||| || || || |||| ||| | | || ||| | | | || Sbjct 23742 CATGCACACAGACTTCGCGTGCCTGCTGTTC---TCCCACCTCAAGAACAAGCCGGACGC 23798 Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 | | | || | ||| | |||| ||||| || | || || || ||||| || || Sbjct 23799 ATCA-CTCGT-GCAGAGCATCATCGTCGAGGCTGTCGCAATTGAGCAAGAATTCCTCACA 23856 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || | |||||| ||| ||||||||||| || |||| ||||| || || Sbjct 23857 GATGCGCTCCCCGTCATGCTCCTCGGCATGAATGCCAAGCTCATGTGCCAGTACATCGAG 23916 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 ||||| || |||||||||||| | | | || | || | |||| || | | ||| Sbjct 23917 TTTGTCGCAGACCGTCTGTTGTTGGCACTCGGCAACCAGAAGTTCTACAACGCCACCAAC 23976 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 ||||| || |||||||| | ||||| || | |||||||| || ||||||||||| ||| Sbjct 23977 CCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTTTTCGAGAAGCGT 24036 Query 61918 GTAGGCGACTATCA 61931 || || ||||| || Sbjct 24037 GTTGGTGACTACCA 24050 >seq668 Length=263430 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/203 (70%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 9147 TTGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCAT 9206 |||||||| |||| || ||||| ||| ||||||| || || |||| || ||||| Sbjct 247737 TTGGGCCCG-TTTATGGCTTCCAATGGAGACATTTTGGCGCCGAATACAAGGACTGTCAC 247679 Query 9207 ACGGACTATACGGGCCAAGGTGTGGATCAG-TTGGCGCAATG-TATGCATCAGATCCAAT 9264 || ||||| || || ||||| || |||||| ||| || | || ||| | || | | Sbjct 247678 ACCGACTACACCGGACAAGGCGTCGATCAGCTTGCCGAAGTGATATCAA--AGCTGAAGA 247621 Query 9265 ATGAGCCGAGTAGTCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGA 9324 | || ||| ||||||||| ||| | | ||||||||| || || || | || | Sbjct 247620 ACGATCCGTACGATCGACGCATCATTCTCAGTGCCTGGAACCCAGCAGACCTGAAGAAAA 247561 Query 9325 TGGTATTGCCGCCATGCCATATG 9347 ||| | | ||||||||||||||| Sbjct 247560 TGGCACTTCCGCCATGCCATATG 247538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397555276084640