Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03- 01] 2,626 sequences; 47,119,461 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1851 87.8 7e-12 >seq1851 Length=380582 Score = 87.8 bits (96), Expect = 7e-12 Identities = 206/311 (66%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793 ||||| || ||| || |||||||| ||| |||| || || || || | ||| | |||| Sbjct 46274 ACATCATAGTAGATGACCTTCATGCCCAGAGACTCGGCAAGCACCGAAAGCTGTGCACCA 46215 Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAA 12853 | | ||||| || ||||| || || ||||||||||| ||||| | ||| || || Sbjct 46214 ACATGTCCATATCCAACTATGCCAAGCGTCTTTCCTCTTACTTCCCAGCAGCCAGCCGAG 46155 Query 12854 GTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGA 12913 |||||||| | || | ||| | || || | | ||| | || ||| | | | | Sbjct 46154 ACTTTGTTCCATACCCCATTGTGCATCTCCATGCTGCGATCGCTAATCTGCCTTGCCAAA 46095 Query 12914 TTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTA 12973 |||| | | || || || | ||||| ||| | | ||||| ||||| || || Sbjct 46094 GTAATGATCTCGCCAATCATCATTTCTGCGACGGAGCGCGAGTTGCTGAAGGGTGAGTTG 46035 Query 12974 AAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAG 13033 ||||||||||| || | | || || | || | ||||||| ||||||||| Sbjct 46034 AAGACTGCAATACCCTGCTCGGCGGCATATTGAAGGTCGACCTGATTTGTGCCAATGCAG 45975 Query 13034 AAGCATCCTAT 13044 ||||| || || Sbjct 45974 AAGCAGCCGAT 45964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884822981819018