Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20eumusae_20[genbank_20GCA_5F001578235.1_202016-03-
01] 2,626 sequences; 47,119,461 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq1851 87.8 7e-12
>seq1851
Length=380582
Score = 87.8 bits (96), Expect = 7e-12
Identities = 206/311 (66%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793
||||| || ||| || |||||||| ||| |||| || || || || | ||| | ||||
Sbjct 46274 ACATCATAGTAGATGACCTTCATGCCCAGAGACTCGGCAAGCACCGAAAGCTGTGCACCA 46215
Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAA 12853
| | ||||| || ||||| || || ||||||||||| ||||| | ||| || ||
Sbjct 46214 ACATGTCCATATCCAACTATGCCAAGCGTCTTTCCTCTTACTTCCCAGCAGCCAGCCGAG 46155
Query 12854 GTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGA 12913
|||||||| | || | ||| | || || | | ||| | || ||| | | | |
Sbjct 46154 ACTTTGTTCCATACCCCATTGTGCATCTCCATGCTGCGATCGCTAATCTGCCTTGCCAAA 46095
Query 12914 TTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTA 12973
|||| | | || || || | ||||| ||| | | ||||| ||||| || ||
Sbjct 46094 GTAATGATCTCGCCAATCATCATTTCTGCGACGGAGCGCGAGTTGCTGAAGGGTGAGTTG 46035
Query 12974 AAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAG 13033
||||||||||| || | | || || | || | ||||||| |||||||||
Sbjct 46034 AAGACTGCAATACCCTGCTCGGCGGCATATTGAAGGTCGACCTGATTTGTGCCAATGCAG 45975
Query 13034 AAGCATCCTAT 13044
||||| || ||
Sbjct 45974 AAGCAGCCGAT 45964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884822981819018
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |