Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1032 257 1e-63 >seq1032 Length=45607 Score = 257 bits (284), Expect = 1e-63 Identities = 588/866 (68%), Gaps = 37/866 (4%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||| ||||||||| ||||| ||||| || |||||||| | |||||| | ||| | Sbjct 29353 ATATGGAACATGTACAAGAAGGCCGAAGCATCATTCTGGACTGCCGAGGAGATTGATCTA 29294 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || || || || |||||||| | ||| | | ||| || || | ||||| Sbjct 29293 TCAAAGGATCTGCATGACTGGAACAAGCGCCTCACCGA-CGACGAGCGTTTCTTCATCTC 29235 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 |||||| | || ||||| ||||| || || || |||||||| ||||| | ||||||| Sbjct 29234 ACATGTTCTTGCATTCTTCGCCGCATCAGATGGCATCGTCAACGAGAACCTGGTGGAACG 29175 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| | || || ||| | || || || || ||||| || |||||||| | Sbjct 29174 CTTCAGCGCCGAAG-TGACAGTACCCGAAGCACGATGCTTCTATGGATTCCAGATCATGA 29116 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||||| ||| | |||||||| || ||||| || |||| Sbjct 29115 TGGAGAACATCCACTCGGAGACATACTCCCTCCTCATCGACACATACATTAGCGAGCCCA 29056 Query 61382 CGGAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACCGGCGGTGAA---GCGGA 61435 ||| |||| || ||||||| |||||| ||| ||| | | || | || || Sbjct 29055 AACAAC--GAAC-ATACCTGTTCAACGCCATC--GACAATATC--CCTTGCATCCGCAGA 29003 Query 61436 AA-GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGAT 61492 || ||||| ||||| || ||||||| | |||| ||| || || | ||| Sbjct 29002 AAGGCGGACTGGGCACTCCGATGGATCAGC--GACAAGAGCTCGACCTTCGCCATGCGAC 28945 Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 || | || || || | || || ||| | || ||| ||||| ||||| | ||||| | Sbjct 28944 TGATTGCCTTCGCTGCAGTTGAAGGTATCTTCTTCTCCGGATCCTTTGCATCCATCTTCT 28885 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 || ||||||| ||||| || ||||| ||||| || ||| ||| ||| | || || |||| Sbjct 28884 GGCTGAAGAAGCGTGGTCTCATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCG 28825 Query 61613 ACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC 61672 |||| |||||||| || || || |||| ||| | | ||| ||| | Sbjct 28824 ACGAAGGCATGCACACCGACTTCGCGTGCCTGCTGTTCTCTC---ACCTGAAGAACAAGC 28768 Query 61673 CGTCGGAGGAGCGTGTGG--GTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAAT 61729 | || ||| ||| | ||| | |||| ||||| || | ||||| ||||| | Sbjct 28767 CCTCAAAGG---CTGTCGTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAGGAGT 28711 Query 61730 TTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGT 61789 | ||||| ||||| | ||| | ||||| |||||||||| | || |||| |||| Sbjct 28710 TCCTGACAGACGCCCTCCCCTGCGCACTCCTCGGCATGAACGCTAAGCTCATGTGCCAGT 28651 Query 61790 ATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATA 61849 | ||||||||||| |||||||||||| | | | | || | || | |||| || Sbjct 28650 ACATTGAATTTGTGGCCGACCGTCTGCTCCTGGCGCTCGGCAACCAGAAGTTCTACAACG 28591 Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAA---TTTTT 61906 | | ||||| || || |||||||| | || ||||||| ||||||||| || || | Sbjct 28590 CCACCAACCCGTTCGACTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACTTCTTCT 28531 Query 61907 TCGAGAAACGTGTAGGCGACTATCAA 61932 ||||||| || || || ||||| ||| Sbjct 28530 TCGAGAAGCGCGTTGGAGACTACCAA 28505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558178455280