Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 257 1e-63
>seq1032
Length=45607
Score = 257 bits (284), Expect = 1e-63
Identities = 588/866 (68%), Gaps = 37/866 (4%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| ||| ||||||||| ||||| ||||| || |||||||| | |||||| | ||| |
Sbjct 29353 ATATGGAACATGTACAAGAAGGCCGAAGCATCATTCTGGACTGCCGAGGAGATTGATCTA 29294
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
|| || || || |||||||| | ||| | | ||| || || | |||||
Sbjct 29293 TCAAAGGATCTGCATGACTGGAACAAGCGCCTCACCGA-CGACGAGCGTTTCTTCATCTC 29235
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|||||| | || ||||| ||||| || || || |||||||| ||||| | |||||||
Sbjct 29234 ACATGTTCTTGCATTCTTCGCCGCATCAGATGGCATCGTCAACGAGAACCTGGTGGAACG 29175
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| |||| | || || ||| | || || || || ||||| || |||||||| |
Sbjct 29174 CTTCAGCGCCGAAG-TGACAGTACCCGAAGCACGATGCTTCTATGGATTCCAGATCATGA 29116
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| |||||||||||| ||| | |||||||| || ||||| || ||||
Sbjct 29115 TGGAGAACATCCACTCGGAGACATACTCCCTCCTCATCGACACATACATTAGCGAGCCCA 29056
Query 61382 CGGAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACCGGCGGTGAA---GCGGA 61435
||| |||| || ||||||| |||||| ||| ||| | | || | || ||
Sbjct 29055 AACAAC--GAAC-ATACCTGTTCAACGCCATC--GACAATATC--CCTTGCATCCGCAGA 29003
Query 61436 AA-GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGAT 61492
|| ||||| ||||| || ||||||| | |||| ||| || || | |||
Sbjct 29002 AAGGCGGACTGGGCACTCCGATGGATCAGC--GACAAGAGCTCGACCTTCGCCATGCGAC 28945
Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552
|| | || || || | || || ||| | || ||| ||||| ||||| | ||||| |
Sbjct 28944 TGATTGCCTTCGCTGCAGTTGAAGGTATCTTCTTCTCCGGATCCTTTGCATCCATCTTCT 28885
Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612
|| ||||||| ||||| || ||||| ||||| || ||| ||| ||| | || || ||||
Sbjct 28884 GGCTGAAGAAGCGTGGTCTCATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCG 28825
Query 61613 ACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC 61672
|||| |||||||| || || || |||| ||| | | ||| ||| |
Sbjct 28824 ACGAAGGCATGCACACCGACTTCGCGTGCCTGCTGTTCTCTC---ACCTGAAGAACAAGC 28768
Query 61673 CGTCGGAGGAGCGTGTGG--GTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAAT 61729
| || ||| ||| | ||| | |||| ||||| || | ||||| ||||| |
Sbjct 28767 CCTCAAAGG---CTGTCGTACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAGGAGT 28711
Query 61730 TTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGT 61789
| ||||| ||||| | ||| | ||||| |||||||||| | || |||| ||||
Sbjct 28710 TCCTGACAGACGCCCTCCCCTGCGCACTCCTCGGCATGAACGCTAAGCTCATGTGCCAGT 28651
Query 61790 ATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATA 61849
| ||||||||||| |||||||||||| | | | | || | || | |||| ||
Sbjct 28650 ACATTGAATTTGTGGCCGACCGTCTGCTCCTGGCGCTCGGCAACCAGAAGTTCTACAACG 28591
Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAA---TTTTT 61906
| | ||||| || || |||||||| | || ||||||| ||||||||| || || |
Sbjct 28590 CCACCAACCCGTTCGACTTCATGGAGAATATCTCGCTGGGTGGCAAGACCAACTTCTTCT 28531
Query 61907 TCGAGAAACGTGTAGGCGACTATCAA 61932
||||||| || || || ||||| |||
Sbjct 28530 TCGAGAAGCGCGTTGGAGACTACCAA 28505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397558178455280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |