Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq264 370 3e-100
seq21 131 5e-28
>seq264
Length=14290
Score = 370 bits (410), Expect = 3e-100
Identities = 257/291 (88%), Gaps = 3/291 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11006 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 10947
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 10946 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 10887
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||||||||||||||||| || |||| ||| | ||| |||||||||||| |||||
Sbjct 10886 AGCCCGCGAAGGACCTTAATGCTAGAAGTTGGGCTTTGACACCCAGTTCCGCTTTATTGA 10827
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||||||||||||||||||||||||| || || |||||||| ||
Sbjct 10826 ATAAGTAAAAAAACGATAAGGGTAGTGGTATTTCAC---CGGCGCTTGCGCTCCCACCTA 10770
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
||||||||| | | ||| |||||||| ||| ||||||||||||||||||
Sbjct 10769 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 10719
Score = 255 bits (282), Expect = 2e-65
Identities = 143/144 (99%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 10416 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 10357
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10356 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 10297
Query 418 CGAGGCATTTGGCTACCTTAAGAG 441
||||||||||||||||||||||||
Sbjct 10296 CGAGGCATTTGGCTACCTTAAGAG 10273
Score = 178 bits (196), Expect = 4e-42
Identities = 101/103 (98%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 9963 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTC 9904
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||| |||||||||
Sbjct 9903 AGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 9861
>seq21
Length=389351
Score = 131 bits (144), Expect = 5e-28
Identities = 89/99 (90%), Gaps = 1/99 (1%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC-ATT 499
|||||||||||||||| |||||||||||||||||||||||||| |||||| || || ||
Sbjct 335509 GAGTCATAGTTACTCCTGCCGTTTACCCGCGCTTGGTTGAATTACTTCACGTTAACAATA 335450
Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACT 538
|||||||||||||||||||||||||||| || | ||||
Sbjct 335449 TAGAGCACTGGGCAGAAATCACATTGCGTTAAGAGCACT 335411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635173460704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |