Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq307 277 3e-72 seq13 107 3e-21 >seq307 Length=335 Score = 277 bits (306), Expect = 3e-72 Identities = 201/229 (88%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 1 GTACAAAAGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 58 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 59 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 118 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| ||||| ||| |||||||| | ||||||||||||||||||| Sbjct 119 ACCCAGACCTTTCGGTCAAGGAGATTAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 178 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 227 >seq13 Length=1759894 Score = 107 bits (118), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 15/182 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||||| |||||| |||| ||||||| ||| ||| | Sbjct 1113389 GTACAATATGCAGGGACGTAACCAACGCAAGCT-GATGACT----------AGGCATT-C 1113436 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA--AGAT 118 ||||||||||| |||||| |||||| |||| | ||| ||||| | | ||||| |||| Sbjct 1113437 CTCGTTGAAGAGTAACAATCGCAATGCTCTACCACCAGCACGAC-AGAGTTCAACAAGAT 1113495 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 || || || || |||| ||||| ||| |||||||| | |||| ||| ||||||||| Sbjct 1113496 TAACCAGATCTTTCGGTCAAGGAGATTAACTCGTTGGCTCTGTCAGCGTACCGCGCGTGC 1113555 Query 179 GG 180 || Sbjct 1113556 GG 1113557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751997304550